RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 RAB3IL1Q8TBN0 382 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 FNDC8Q8TC99 324 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 SGK3Q96BR1 496 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 ERLEC1Q96DZ1 483 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 TIMMDC1Q9NPL8 285 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 SLC17A7Q9P2U7 560 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 CACNG4Q9UBN1 327 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 PCP4L1A6NKN8 68 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 H3BSA7 217 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 PIK3R2O00459 728 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 GABRDO14764 452 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 NCAM2O15394 837 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 PAPSS1O43252 624 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 SULT1B1O43704 296 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 LIASO43766 372 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 TRMUO75648 421 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 TFAP2AP05549 437 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 CCDC130P13994 396 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 KLRC2P26717 231 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 GCAP28676 217 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 PMLP29590 882 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 RGS7P49802 495 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 ARSEP51690 589 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 RAP1GDS1P52306 607 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 ALDH18A1P54886 795 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 LPIN1Q14693 890 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 C16orf72Q14CZ0 275 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 TAF5Q15542 800 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 CCDC142Q17RM4 750 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 RABGAP1LQ5R372 815 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 FCRLBQ6BAA4 426 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 FBXL19Q6PCT2 694 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 TRAF7Q6Q0C0 670 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 METTL25Q8N6Q8 603 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 GIPC3Q8TF64 312 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 LPPQ93052 612 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 METTL2AQ96IZ6 378 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 CNBD2Q96M20 576 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 TUBA1CQ9BQE3 449 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 C11orf84Q9BUA3 381 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 S100A14Q9HCY8 104 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 MARCOQ9UEW3 520 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 ADAMTS6Q9UKP5 1117 aa8.1□□□□□ -1.11
PDLIM5-221ENST00000542407 CCDC163A0A0D9SF12 145 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 C17orf113A0A1B0GUU1 675 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 CAPN8A6NHC0 703 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 E2F3O00716 465 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 MAGEC1O60732 1142 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 TM7SF2O76062 418 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 ENDOD1O94919 500 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 ARHGEF15O94989 841 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 APBB3O95704 486 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 TRUB2O95900 331 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 NPPAP01160 153 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 EIF2S1P05198 315 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 RPLP2P05387 115 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 CD48P09326 243 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 BGNP21810 368 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 MIPP30301 263 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 PDIA2Q13087 525 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 OASLQ15646 514 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 SMTNL2Q2TAL5 461 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 ANKRD20A4Q4UJ75 823 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 INO80DQ53TQ3 878 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 TFDP3Q5H9I0 405 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 FAM47CQ5HY64 1035 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 KIAA0319Q5VV43 1072 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 FAM180BQ6P0A1 224 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 PRPF39Q86UA1 669 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 ZBED8Q8IZ13 594 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 ADGRF2Q8IZF7 708 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 POU5F2Q8N7G0 328 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 ANKRD52Q8NB46 1076 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 C3orf58Q8NDZ4 430 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 CMASQ8NFW8 434 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 RIN3Q8TB24 985 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 CD99L2Q8TCZ2 262 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 ZNF398Q8TD17 642 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 FAM172AQ8WUF8 416 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 PMEPA1Q969W9 287 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 RILPQ96NA2 401 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 STARD7Q9NQZ5 370 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 ABI2Q9NYB9 513 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 SELENONQ9NZV5 590 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 PCDHGB4Q9UN71 923 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 PCDHGB5Q9Y5G0 923 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 COL4A4P53420 1690 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 ARL5CA6NH57 179 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 SMIM18P0DKX4 95 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 HOXB1P14653 301 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 GPD1P21695 349 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 KDELR1P24390 212 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 PSMA4P25789 261 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 CD52P31358 61 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 SLC5A2P31639 672 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 THPOP40225 353 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 STT3AP46977 705 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 SLC6A3Q01959 620 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 CAV1Q03135 178 aa8.09□□□□□ -1.11
PDLIM5-221ENST00000542407 CDK18Q07002 472 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms