RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 GOT1P17174 413 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 L1CAMP32004 1257 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 HTR7P34969 479 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 CTSOP43234 321 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 RXRGP48443 463 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 CCR5P51681 352 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 ZNF135P52742 658 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 ADPRHP54922 357 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 RPS24P62847 133 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 CCZ1BP86790 482 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 CCZ1P86791 482 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 SLC25A11Q02978 314 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 CDH18Q13634 790 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 STAT4Q14765 748 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 HADHQ16836 314 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 BOLA3Q53S33 107 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 ARTNQ5T4W7 220 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 ERMARDQ5T6L9 678 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 MANEALQ5VSG8 457 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 KIAA1614Q5VZ46 1190 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 NAPEPLDQ6IQ20 393 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 LRRC31Q6UY01 552 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 CYP4V2Q6ZWL3 525 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 C14orf80Q86SX3 495 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 SPATS2Q86XZ4 545 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 STK40Q8N2I9 435 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 AADATQ8N5Z0 425 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 DCBLD1Q8N8Z6 715 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 MFSD2AQ8NA29 543 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 ACRBPQ8NEB7 543 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 FIBINQ8TAL6 211 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 TEKT4Q8WW24 435 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 MYEOVQ96EZ4 313 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 RPL10LQ96L21 214 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 RPRD1AQ96P16 312 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 SIK2Q9H0K1 926 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 ABCG4Q9H172 646 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 ERVMER34-1Q9H9K5 563 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 TMPRSS4Q9NRS4 437 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 VANGL2Q9ULK5 521 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
CLSTN3-212ENST00000541770 ASH1LQ9NR48 2969 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 KNTC1P50748 2209 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 EDDM13A0A1B0GTR0 161 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 TARSL2A2RTX5 802 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 TRIM38O00635 465 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 CSO75390 466 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 CLDN11O75508 207 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 LUC7L3O95232 432 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 WISP1O95388 367 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 MOCS3O95396 460 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 ADH1BP00325 375 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 MYF5P13349 255 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 C5AR1P21730 350 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 IL1R2P27930 398 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 SLC1A1P43005 524 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 CDH4P55283 916 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 OXCT1P55809 520 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 SLC12A1Q13621 1099 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 MESDQ14696 234 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 PROX2Q3B8N5 592 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 C3orf38Q5JPI3 329 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 PITRM1Q5JRX3 1037 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 C9orf64Q5T6V5 341 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 ZNF662Q6ZS27 426 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 KANSL1Q7Z3B3 1105 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 KIAA1328Q86T90 577 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 LSMEM2Q8N112 164 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 CACTIN-AS1Q8N1I8 211 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 CFAP52Q8N1V2 620 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 TTC17Q96AE7 1141 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 WBP1Q96G27 269 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 KLHDC7BQ96G42 594 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 LMLNQ96KR4 655 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 MRGPRX3Q96LB0 322 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 DEPDC7Q96QD5 511 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 PEBP4Q96S96 227 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 SNRNP25Q9BV90 132 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 TRIM4Q9C037 500 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 ZYG11BQ9C0D3 744 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 LACRTQ9GZZ8 138 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 PCSK1NQ9UHG2 260 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 SLCO3A1Q9UIG8 710 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 INTS6Q9UL03 887 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 AP4E1Q9UPM8 1137 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 CA5BQ9Y2D0 317 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 PTPRQQ9UMZ3 2332 aa8.87□□□□□ -0.99
CLSTN3-212ENST00000541770 HELZ2Q9BYK8 2649 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 WASH4PA8MWX3 477 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 FAM72CH0Y354 149 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 BUB1BO60566 1050 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 SRGAP2O75044 1071 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 LRIG2O94898 1065 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 SRPRAP08240 638 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 KRT7P08729 469 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 C7P10643 843 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 TCF4P15884 667 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 MZF1P28698 734 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms