RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SPAG6O75602 509 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 SLITRK3O94933 977 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 REC8O95072 547 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 URODP06132 367 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 PIM1P11309 404 aaPredicted RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 AGAP20933 346 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 CD9P21926 228 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 HOXA10P31260 410 aaPredicted RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 HOXA13P31271 388 aaPredicted RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 SOX6P35712 828 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 MAGEA4P43358 317 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 CAPZA1P52907 286 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 GBX2P52951 348 aaPredicted RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 KIAA1024LP59773 190 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ARHGAP8P85298 464 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 GRIN1Q05586 938 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 NIPAL4Q0D2K0 466 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 TCF15Q12870 199 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 CDK5R2Q13319 367 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 CUL2Q13617 745 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 THOC5Q13769 683 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 MXD4Q14582 209 aaPredicted RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 KCNAB1Q14722 419 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 SLC9B1Q4ZJI4 515 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 USP39Q53GS9 565 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 XKR9Q5GH70 373 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ADGRF1Q5T601 910 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 JADE1Q6IE81 842 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 DPY19L2P1Q6NXN4 242 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 TMEM270Q6UE05 265 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ZYG11AQ6WRX3 759 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ZPBP2Q6X784 338 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 PTCHD4Q6ZW05 846 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 SPATA19Q7Z5L4 167 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 FAM83AQ86UY5 434 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 HOOK3Q86VS8 718 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 DCP2Q8IU60 420 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 TMEM151BQ8IW70 566 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 FAM185AQ8N0U4 392 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 SYNE4Q8N205 404 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 POU5F2Q8N7G0 328 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ANKRD53Q8N9V6 530 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 OR6C4Q8NGE1 309 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ZNF417Q8TAU3 575 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 NOC3LQ8WTT2 800 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 RAB7BQ96AH8 199 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 KLHL29Q96CT2 875 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 SAT2Q96F10 170 aaPredicted RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 FAM84AQ96KN4 292 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 CNOT6LQ96LI5 555 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 GAL3ST4Q96RP7 486 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 CTAGE1Q96RT6 745 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ZNF587Q96SQ5 575 aaPredicted RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 MGME1Q9BQP7 344 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 MECRQ9BV79 373 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 YIPF2Q9BWQ6 316 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 BTBD2Q9BX70 525 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ZNF341Q9BYN7 854 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 WDR11Q9BZH6 1224 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 FAM129AQ9BZQ8 928 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 IMPG2Q9BZV3 1241 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 IQCGQ9H095 443 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 OR10A5Q9H207 317 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 DPH5Q9H2P9 285 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 DENND2DQ9H6A0 471 aaPredicted RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 TRPV5Q9NQA5 729 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 C1GALT1Q9NS00 363 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 DDX18Q9NVP1 670 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 DONSONQ9NYP3 566 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 GGA1Q9UJY5 639 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 CDYLQ9Y232 598 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ATP11BQ9Y2G3 1177 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 ASB3Q9Y575 518 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 SBF1O95248 1867 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 L7N2F9 121 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 MAGEB3O15480 346 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 PAPSS1O43252 624 aaPredicted RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 HNRNPCL1O60812 293 aaKnown RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 PAGE4O60829 102 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 HEXIM1O94992 359 aaKnown RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 ADCY5O95622 1261 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 CER1O95813 267 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 GASTP01350 101 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 NTRK1P04629 796 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 ITGB2P05107 769 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 CSF1RP07333 972 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 NID1P14543 1247 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 DPEP1P16444 411 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 KCNA3P22001 575 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 TCEA1P23193 301 aaKnown RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 CPOXP36551 454 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 PMS2P54278 862 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 CTSWP56202 376 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 ERVFC1P60507 584 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 MECOMQ03112 1051 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 KRT17Q04695 432 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 PRKCZQ05513 592 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 RIPK1Q13546 671 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 ZNF273Q14593 569 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms