RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 NRG1Q02297 640 aaPredicted RBP24.36■■□□□ 1.49
LEMD3-203ENST00000541171 MYLK3Q32MK0 819 aa24.36■■□□□ 1.49
LEMD3-203ENST00000541171 LRRC73Q5JTD7 316 aa24.36■■□□□ 1.49
LEMD3-203ENST00000541171 ZCCHC8Q6NZY4 707 aaKnown RBP24.36■■□□□ 1.49
LEMD3-203ENST00000541171 ZSCAN30Q86W11 494 aa24.36■■□□□ 1.49
LEMD3-203ENST00000541171 CCDC185Q8N715 623 aa24.36■■□□□ 1.49
LEMD3-203ENST00000541171 ZNF248Q8NDW4 579 aa24.36■■□□□ 1.49
LEMD3-203ENST00000541171 ZNF578Q96N58 590 aaPredicted RBP24.36■■□□□ 1.49
LEMD3-203ENST00000541171 NUP62CLQ9H1M0 184 aa24.36■■□□□ 1.49
LEMD3-203ENST00000541171 MAGEH1Q9H213 219 aa24.36■■□□□ 1.49
LEMD3-203ENST00000541171 NLRC4Q9NPP4 1024 aa24.36■■□□□ 1.49
LEMD3-203ENST00000541171 CSNK1G3Q9Y6M4 447 aa24.36■■□□□ 1.49
LEMD3-203ENST00000541171 C2CD4BA6NLJ0 364 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 RAMP2O60895 175 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 POP4O95707 220 aaKnown RBP24.35■■□□□ 1.49
LEMD3-203ENST00000541171 PCBP4P57723 403 aaKnown RBP24.35■■□□□ 1.49
LEMD3-203ENST00000541171 POLR2FP61218 127 aaKnown RBP24.35■■□□□ 1.49
LEMD3-203ENST00000541171 EIF2B5Q13144 721 aaKnown RBP24.35■■□□□ 1.49
LEMD3-203ENST00000541171 GUSBP11Q6P575 273 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 CRTC1Q6UUV9 634 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 EFL1Q7Z2Z2 1120 aaKnown RBP24.35■■□□□ 1.49
LEMD3-203ENST00000541171 TTC7BQ86TV6 843 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 VPS36Q86VN1 386 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 RBFAQ8N0V3 343 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 LSMEM2Q8N112 164 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 NETO2Q8NC67 525 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 FAM172AQ8WUF8 416 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 IL12RB2Q99665 862 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 POLR1BQ9H9Y6 1135 aa24.35■■□□□ 1.49
LEMD3-203ENST00000541171 FAM207AQ9NSI2 230 aaPredicted RBP24.35■■□□□ 1.49
LEMD3-203ENST00000541171 TK2O00142 265 aa24.34■■□□□ 1.49
LEMD3-203ENST00000541171 BUB1O43683 1085 aa24.34■■□□□ 1.49
LEMD3-203ENST00000541171 TGM2P21980 687 aa24.34■■□□□ 1.49
LEMD3-203ENST00000541171 ANP32AP39687 249 aaKnown RBP24.34■■□□□ 1.49
LEMD3-203ENST00000541171 THOP1P52888 689 aa24.34■■□□□ 1.49
LEMD3-203ENST00000541171 PFN3P60673 137 aa24.34■■□□□ 1.49
LEMD3-203ENST00000541171 C1orf61Q13536 156 aa24.34■■□□□ 1.49
LEMD3-203ENST00000541171 STRADAQ7RTN6 431 aa24.34■■□□□ 1.49
LEMD3-203ENST00000541171 DENND6BQ8NEG7 585 aa24.34■■□□□ 1.49
LEMD3-203ENST00000541171 ASB12Q8WXK4 309 aa24.34■■□□□ 1.49
LEMD3-203ENST00000541171 TCEAL2Q9H3H9 227 aaPredicted RBP24.34■■□□□ 1.49
LEMD3-203ENST00000541171 CXorf51AA0A1B0GTR3 108 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 KDELR3O43731 214 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 MMP20O60882 483 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 KRT3P12035 628 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 ITIH2P19823 946 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 SOX5P35711 763 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 PTPN9P43378 593 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 LSSP48449 732 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 HDAC4P56524 1084 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 ISXQ2M1V0 245 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 GDPD4Q6W3E5 623 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 BTN2A2Q8WVV5 523 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 ARHGEF26Q96DR7 871 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 OSBPL1AQ9BXW6 950 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 RETREG1Q9H6L5 497 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 CHMP5Q9NZZ3 219 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 SPASTQ9UBP0 616 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 APOBEC3BQ9UH17 382 aaKnown RBP24.33■■□□□ 1.49
LEMD3-203ENST00000541171 SALL4Q9UJQ4 1053 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 NEU3Q9UQ49 428 aa24.33■■□□□ 1.49
LEMD3-203ENST00000541171 TEX51A0A1B0GUA7 166 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 C1QL1O75973 258 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 TMCC1O94876 653 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 ADKP55263 362 aaKnown RBP24.32■■□□□ 1.48
LEMD3-203ENST00000541171 PTK2BQ14289 1009 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 NR0B2Q15466 257 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 PRRT3Q5FWE3 981 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 C3orf38Q5JPI3 329 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 BROXQ5VW32 411 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 PYROXD2Q8N2H3 581 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 CXorf40AQ8TE69 158 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 CENPIQ92674 756 aaPredicted RBP24.32■■□□□ 1.48
LEMD3-203ENST00000541171 VOPP1Q96AW1 172 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 CENPTQ96BT3 561 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 HIC2Q96JB3 615 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 GDAP1L1Q96MZ0 367 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 PCDHB18PQ96TA0 734 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 SELENOOQ9BVL4 669 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 NCKIPSDQ9NZQ3 722 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 ADAM22Q9P0K1 906 aa24.32■■□□□ 1.48
LEMD3-203ENST00000541171 AREL1O15033 823 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 MUSKO15146 869 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 EPHB6O15197 1021 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 GCATO75600 419 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 ZIC2O95409 532 aaPredicted RBP24.31■■□□□ 1.48
LEMD3-203ENST00000541171 RFC1P35251 1148 aaPredicted RBP24.31■■□□□ 1.48
LEMD3-203ENST00000541171 IGFALSP35858 605 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 RAD51Q06609 339 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 SCYL2Q6P3W7 929 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 TRIM72Q6ZMU5 477 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 PHACTR4Q8IZ21 702 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 WRAP53Q9BUR4 548 aaKnown RBP24.31■■□□□ 1.48
LEMD3-203ENST00000541171 KLC2Q9H0B6 622 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 PNMA8BQ9ULN7 279 aaPredicted RBP24.31■■□□□ 1.48
LEMD3-203ENST00000541171 SATB2Q9UPW6 733 aa24.31■■□□□ 1.48
LEMD3-203ENST00000541171 EME2A4GXA9 379 aaPredicted RBP24.3■■□□□ 1.48
LEMD3-203ENST00000541171 TPP1O14773 563 aa24.3■■□□□ 1.48
LEMD3-203ENST00000541171 TM7SF2O76062 418 aa24.3■■□□□ 1.48
LEMD3-203ENST00000541171 DXOO77932 396 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms