RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TLR10Q9BXR5 811 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 PREBQ9HCU5 417 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 TRMT1Q9NXH9 659 aaKnown RBP19.01■□□□□ 0.63
VPS33A-205ENST00000541169 PCDHGA5Q9Y5G8 931 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.01■□□□□ 0.63
VPS33A-205ENST00000541169 A0A1W2PP55 124 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 SEMA4FO95754 770 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 CR2P20023 1033 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 DRD3P35462 400 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 BCL2L1Q07817 233 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 KLF1Q13351 362 aaPredicted RBP19■□□□□ 0.63
VPS33A-205ENST00000541169 SLC45A4Q5BKX6 768 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 DCAF12L1Q5VU92 463 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 PRR23BQ6ZRT6 265 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 AADATQ8N5Z0 425 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 NETO2Q8NC67 525 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 OR2T34Q8NGX1 318 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 ACTL9Q8TC94 416 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 ZNF419Q96HQ0 510 aaPredicted RBP19■□□□□ 0.63
VPS33A-205ENST00000541169 PBKQ96KB5 322 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 PPP1R2P1Q96PQ5 205 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 QKIQ96PU8 341 aaKnown RBP eCLIP19■□□□□ 0.63
VPS33A-205ENST00000541169 NAP1L3Q99457 506 aaPredicted RBP19■□□□□ 0.63
VPS33A-205ENST00000541169 NEUROG2Q9H2A3 272 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 SUV39H2Q9H5I1 410 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 SCUBE2Q9NQ36 999 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 HOMER3Q9NSC5 361 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 EVLQ9UI08 416 aaPredicted RBP19■□□□□ 0.63
VPS33A-205ENST00000541169 TRHDEQ9UKU6 1024 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 SARDHQ9UL12 918 aa19■□□□□ 0.63
VPS33A-205ENST00000541169 SMG5Q9UPR3 1016 aaKnown RBP19■□□□□ 0.63
VPS33A-205ENST00000541169 CES2O00748 559 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 INSIG1O15503 277 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 PLRG1O43660 514 aaKnown RBP18.99■□□□□ 0.63
VPS33A-205ENST00000541169 AP1G1O43747 822 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 FOXD2O60548 495 aaPredicted RBP18.99■□□□□ 0.63
VPS33A-205ENST00000541169 MAP3K6O95382 1288 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 PECAM1P16284 738 aaPredicted RBP18.99■□□□□ 0.63
VPS33A-205ENST00000541169 ADCY2Q08462 1091 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 ZNF211Q13398 564 aaPredicted RBP18.99■□□□□ 0.63
VPS33A-205ENST00000541169 SLC14A2Q15849 920 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 TEX44Q53QW1 395 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 WDR45BQ5MNZ6 344 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 NPNTQ6UXI9 565 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.99■□□□□ 0.63
VPS33A-205ENST00000541169 CACUL1Q86Y37 369 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 NDUFAF2Q8N183 169 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 NT5MQ9NPB1 228 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 SAE1Q9UBE0 346 aaPredicted RBP18.99■□□□□ 0.63
VPS33A-205ENST00000541169 MBD1Q9UIS9 605 aaPredicted RBP18.99■□□□□ 0.63
VPS33A-205ENST00000541169 GMEB2Q9UKD1 530 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 ATP8A1Q9Y2Q0 1164 aa18.99■□□□□ 0.63
VPS33A-205ENST00000541169 TSPAN11A1L157 253 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 BCLAF3A2AJT9 711 aaKnown RBP18.98■□□□□ 0.63
VPS33A-205ENST00000541169 CFAP69A5D8W1 941 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 C16orf96A6NNT2 1141 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 H7C0C1 242 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 LRP3O75074 770 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 JCHAINP01591 159 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 UGT2B4P06133 528 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 RETP07949 1114 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 SERPINF2P08697 491 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 ADRB3P13945 408 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 ATP5OP48047 213 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 CCR5P51681 352 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 ADPRHP54922 357 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 EIF3EP60228 445 aaKnown RBP18.98■□□□□ 0.63
VPS33A-205ENST00000541169 OTUD4Q01804 1114 aaKnown RBP18.98■□□□□ 0.63
VPS33A-205ENST00000541169 ITKQ08881 620 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 ELP6Q0PNE2 266 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 CNTN1Q12860 1018 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 AGBL4Q5VU57 503 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 NCEH1Q6PIU2 408 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 ZC3H18Q86VM9 953 aaKnown RBP18.98■□□□□ 0.63
VPS33A-205ENST00000541169 SLC13A5Q86YT5 568 aaPredicted RBP18.98■□□□□ 0.63
VPS33A-205ENST00000541169 FAM160A2Q8N612 972 aaPredicted RBP18.98■□□□□ 0.63
VPS33A-205ENST00000541169 SUMF1Q8NBK3 374 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 OR6K2Q8NGY2 324 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 OR14C36Q8NHC7 312 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 HTR3CQ8WXA8 447 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 EXOC2Q96KP1 924 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 KLHL32Q96NJ5 620 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 PYCARDQ9ULZ3 195 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 SPAG17Q6Q759 2223 aa18.98■□□□□ 0.63
VPS33A-205ENST00000541169 METTL12A8MUP2 240 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 KCNK1O00180 336 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 TSPAN6O43657 245 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 RBP3P10745 1247 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 XPAP23025 273 aaPredicted RBP18.97■□□□□ 0.63
VPS33A-205ENST00000541169 STIP1P31948 543 aaKnown RBP18.97■□□□□ 0.63
VPS33A-205ENST00000541169 ACSL1P33121 698 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 RPL26P61254 145 aaKnown RBP18.97■□□□□ 0.63
VPS33A-205ENST00000541169 SRSF5Q13243 272 aaKnown RBP18.97■□□□□ 0.63
VPS33A-205ENST00000541169 LLGL1Q15334 1064 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 PIP5KL1Q5T9C9 394 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 LYSMD4Q5XG99 296 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 FAM124AQ86V42 546 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 PGBD5Q8N414 524 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 GPR161Q8N6U8 529 aaKnown RBP18.97■□□□□ 0.63
VPS33A-205ENST00000541169 ECHDC3Q96DC8 303 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms