RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CSNK1EP49674 416 aaKnown RBP9.35□□□□□ -0.91
SNHG1-215ENST00000540904 CCR5P51681 352 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 VAV2P52735 878 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 GSDMDP57764 484 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 SLC10A7Q0GE19 358 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 ZNF235Q14590 738 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 LBRQ14739 615 aaKnown RBP9.35□□□□□ -0.91
SNHG1-215ENST00000540904 PAFAH1B3Q15102 231 aaKnown RBP9.35□□□□□ -0.91
SNHG1-215ENST00000540904 TMCO4Q5TGY1 634 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 PQLC3Q8N755 202 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 OR2I1PQ8NGU4 316 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 TPCN2Q8NHX9 752 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 C1orf216Q8TAB5 229 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-215ENST00000540904 NSMCE1Q8WV22 266 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 VOPP1Q96AW1 172 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-215ENST00000540904 FAF2Q96CS3 445 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 SERAC1Q96JX3 654 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 SLC6A18Q96N87 628 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 ZNF599Q96NL3 588 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 RNF157Q96PX1 679 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 ORAI3Q9BRQ5 295 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 PREBQ9HCU5 417 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 TMEM9BQ9NQ34 198 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 AASDHPPTQ9NRN7 309 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 DDX56Q9NY93 547 aaKnown RBP9.35□□□□□ -0.91
SNHG1-215ENST00000540904 SEPT3Q9UH03 358 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 SPAG17Q6Q759 2223 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 A0A1W2PQU0 124 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 ZNF487B1APH4 448 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 NEMP1O14524 444 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 APOL1O14791 398 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 SLC30A4O14863 429 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 MUSKO15146 869 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 SLC31A1O15431 190 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 LATO43561 262 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 PSTPIP1O43586 416 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 GJB3O75712 270 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 PEX11BO96011 259 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 PRLRP16471 622 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 GARSP41250 739 aaKnown RBP9.34□□□□□ -0.91
SNHG1-215ENST00000540904 ABL2P42684 1182 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 SCNN1BP51168 640 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 RENBPP51606 427 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 LIMK1P53667 647 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 DYNLT1P63172 113 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 RACK1P63244 317 aaKnown RBP9.34□□□□□ -0.91
SNHG1-215ENST00000540904 GBE1Q04446 702 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 GALNT2Q10471 571 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 SLC10A2Q12908 348 aaPredicted RBP9.34□□□□□ -0.91
SNHG1-215ENST00000540904 GRIK2Q13002 908 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 PUM1Q14671 1186 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNHG1-215ENST00000540904 GRM3Q14832 879 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 LLGL1Q15334 1064 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 TEAD4Q15561 434 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 ZNF284Q2VY69 593 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 UAP1L1Q3KQV9 507 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 LRRC73Q5JTD7 316 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 CFAP58Q5T655 872 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 MARC1Q5VT66 337 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 SEL1L3Q68CR1 1132 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 C11orf63Q6NUN7 778 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 NEK5Q6P3R8 708 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 MFSD7Q6UXD7 560 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 ADAT2Q7Z6V5 191 aaKnown RBP9.34□□□□□ -0.91
SNHG1-215ENST00000540904 SRLQ86TD4 932 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 TTC7BQ86TV6 843 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 PRPF39Q86UA1 669 aaKnown RBP9.34□□□□□ -0.91
SNHG1-215ENST00000540904 TRIM69Q86WT6 500 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 RFX6Q8HWS3 928 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 CAMK1DQ8IU85 385 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 LRRC49Q8IUZ0 686 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 BBS5Q8N3I7 341 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 MINDY1Q8N5J2 469 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 PAF1Q8N7H5 531 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 CCNYQ8ND76 341 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 LRRN4Q8WUT4 740 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 KLK6Q92876 244 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 PSKH2Q96QS6 385 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 TUBGCP5Q96RT8 1024 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 CPEB1Q9BZB8 566 aaKnown RBP9.34□□□□□ -0.91
SNHG1-215ENST00000540904 SUV39H2Q9H5I1 410 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 ATP13A3Q9H7F0 1226 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 DLL3Q9NYJ7 618 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 DTLQ9NZJ0 730 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 TPX2Q9ULW0 747 aaKnown RBP9.34□□□□□ -0.91
SNHG1-215ENST00000540904 ITM2BQ9Y287 266 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 HEY1Q9Y5J3 304 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 FADS3Q9Y5Q0 445 aa9.34□□□□□ -0.91
SNHG1-215ENST00000540904 A0A0U1RQJ8 604 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 MACROD2A1Z1Q3 448 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 TTC24A2A3L6 582 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 DCDC2BA2VCK2 349 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 GOLGA6L3A6NEY3 463 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 BTNL10A8MVZ5 291 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 C10orf142B7Z368 130 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 WNT9AO14904 365 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 AP1G1O43747 822 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 ZRANB2O95218 330 aaKnown RBP eCLIP9.33□□□□□ -0.924e-9■■■■■ 32.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms