RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 POTEHQ6S545 545 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 RIPOR1Q6ZS17 1223 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 STARD8Q92502 1023 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 ABTB1Q969K4 478 aaPredicted RBP14.23□□□□□ -0.13
USP3-204ENST00000540797 KCTD15Q96SI1 283 aaPredicted RBP14.23□□□□□ -0.13
USP3-204ENST00000540797 MYCBPQ99417 103 aaPredicted RBP14.23□□□□□ -0.13
USP3-204ENST00000540797 EXOSC4Q9NPD3 245 aaKnown RBP14.23□□□□□ -0.13
USP3-204ENST00000540797 CYLDQ9NQC7 956 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 HBS1LQ9Y450 684 aaKnown RBP14.23□□□□□ -0.13
USP3-204ENST00000540797 CHD2O14647 1828 aaKnown RBP14.23□□□□□ -0.13
USP3-204ENST00000540797 UGT2B4P06133 528 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 IMPDH2P12268 514 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 LMO2P25791 158 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 BLVRAP53004 296 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 TMED1Q13445 227 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 FAM228AQ86W67 206 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 RAB21Q9UL25 225 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 SNX13Q9Y5W8 968 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 NRXN3Q9Y4C0 1643 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 USP1O94782 785 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 CNKSR3Q6P9H4 555 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 CNSTQ6PJW8 725 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 KYQ8NBH2 561 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 USP7Q93009 1102 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 SNX6Q9UNH7 406 aa14.23□□□□□ -0.13
USP3-204ENST00000540797 CD3EAPO15446 510 aaKnown RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 BANF1O75531 89 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 ALADP13716 330 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 TSHRP16473 764 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 ATP6V1B2P21281 511 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 POU1F1P28069 291 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 PSMD8P48556 350 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 YBEYP58557 167 aaPredicted RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 GPM6BQ13491 265 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 PEX6Q13608 980 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 CRTC3Q6UUV7 619 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 ZNF662Q6ZS27 426 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 SRLQ86TD4 932 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 RBFAQ8N0V3 343 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 FLCNQ8NFG4 579 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 TFEBP19484 476 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 TLX1P31314 330 aaPredicted RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 S100A3P33764 101 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 RPS7P62081 194 aaKnown RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 SPIDRQ14159 915 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 CRYMQ14894 314 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 TIGD5Q53EQ6 642 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 MON1BQ7L1V2 547 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 PGM2Q96G03 612 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 FERD3LQ96RJ6 166 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 VPS45Q9NRW7 570 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 WRAP73Q9P2S5 460 aaPredicted RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 EVLQ9UI08 416 aaPredicted RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 INSL6Q9Y581 213 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 NRP1O14786 923 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 GTF2E2P29084 291 aaKnown RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 SERPINB10P48595 397 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 ZNF792Q3KQV3 632 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 ZNF75CPQ92670 426 aaPredicted RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 KRT84Q9NSB2 600 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 FBXO5Q9UKT4 447 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 ZFP37Q9Y6Q3 630 aaPredicted RBP14.22□□□□□ -0.13
USP3-204ENST00000540797 SNED1Q8TER0 1413 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 ISM1B1AKI9 464 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 STBD1O95210 358 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 VAC14Q08AM6 782 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 ZBTB17Q13105 803 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 CTBP1Q13363 440 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 TEX44Q53QW1 395 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 FBXW10Q5XX13 1052 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 TAC4Q86UU9 113 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 SLC27A6Q9Y2P4 619 aa14.22□□□□□ -0.13
USP3-204ENST00000540797 ABHD14A-ACY1A0A1B0GW23 586 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 SNTNA6NMZ2 147 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 HTR7P34969 479 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 CCT8P50990 548 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 CDH4P55283 916 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 NOMO1Q15155 1222 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 DNAJC14Q6Y2X3 702 aaPredicted RBP14.21□□□□□ -0.13
USP3-204ENST00000540797 PLD3Q8IV08 490 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 EIF1ADQ8N9N8 165 aaKnown RBP14.21□□□□□ -0.13
USP3-204ENST00000540797 SIKE1Q9BRV8 207 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 ZFYVE1Q9HBF4 777 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 SPATS2LQ9NUQ6 558 aaKnown RBP14.21□□□□□ -0.13
USP3-204ENST00000540797 COMMD8Q9NX08 183 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 CROTQ9UKG9 612 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 ZNF536O15090 1300 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 A0A1B0GVM2 712 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 TCAF2A6NFQ2 919 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 RNASEH2AO75792 299 aaKnown RBP14.21□□□□□ -0.13
USP3-204ENST00000540797 COX7A2P14406 83 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 RPL14P50914 215 aaKnown RBP14.21□□□□□ -0.13
USP3-204ENST00000540797 RAB10P61026 200 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 NPY5RQ15761 445 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 CAMKK1Q8N5S9 505 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 LRRN4CLQ8ND94 238 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 FNIP1Q8TF40 1166 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 DNAJC9Q8WXX5 260 aa14.21□□□□□ -0.13
USP3-204ENST00000540797 FIG4Q92562 907 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms