RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 TCF7L2Q9NQB0 619 aa3.81□□□□□ -1.8
MDM2-227ENST00000540709 ATP8A2Q9NTI2 1148 aa3.81□□□□□ -1.8
MDM2-227ENST00000540709 FBXO40Q9UH90 709 aa3.81□□□□□ -1.8
MDM2-227ENST00000540709 AGO1Q9UL18 857 aaKnown RBP3.81□□□□□ -1.8
MDM2-227ENST00000540709 CNPY2Q9Y2B0 182 aa3.81□□□□□ -1.8
MDM2-227ENST00000540709 DERAQ9Y315 318 aa3.81□□□□□ -1.8
MDM2-227ENST00000540709 RRP7AQ9Y3A4 280 aaKnown RBP3.81□□□□□ -1.8
MDM2-227ENST00000540709 TCF20Q9UGU0 1960 aaKnown RBP3.8□□□□□ -1.8
MDM2-227ENST00000540709 SAA2-SAA4A0A096LPE2 208 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 TYW5A2RUC4 315 aaKnown RBP3.8□□□□□ -1.8
MDM2-227ENST00000540709 SERPINC1P01008 464 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 MT3P25713 68 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 ADD2P35612 726 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 HNF1BP35680 557 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 GJC1P36383 396 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 POU3F1Q03052 451 aaPredicted RBP3.8□□□□□ -1.8
MDM2-227ENST00000540709 TAF5Q15542 800 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 PDCD2Q16342 344 aaPredicted RBP3.8□□□□□ -1.8
MDM2-227ENST00000540709 TUBB8Q3ZCM7 444 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 EFHC1Q5JVL4 640 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 NAPEPLDQ6IQ20 393 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 RHBDF2Q6PJF5 856 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 PGBD5Q8N414 524 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 CEP70Q8NHQ1 597 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 SPATA20Q8TB22 786 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 STAMQ92783 540 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 RNF183Q96D59 192 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 MSTO1Q9BUK6 570 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 SLC32A1Q9H598 525 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 TTC12Q9H892 705 aaPredicted RBP3.8□□□□□ -1.8
MDM2-227ENST00000540709 ZNF556Q9HAH1 456 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 CLK4Q9HAZ1 481 aaKnown RBP3.8□□□□□ -1.8
MDM2-227ENST00000540709 ENTPD7Q9NQZ7 604 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 HDAC6Q9UBN7 1215 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 SUFUQ9UMX1 484 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 SNX9Q9Y5X1 595 aa3.8□□□□□ -1.8
MDM2-227ENST00000540709 A0A087WYN8 130 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 hCG_1642624A0A1W2PR95 340 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 hDV102S1A0JD36 115 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 SLC16A5O15375 505 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 VNN2O95498 520 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 ADAP00813 363 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 SNRNP70P08621 437 aaKnown RBP3.79□□□□□ -1.8
MDM2-227ENST00000540709 WEE2P0C1S8 567 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 CTPS1P17812 591 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 DCTDP32321 178 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 LIFRP42702 1097 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 MCM2P49736 904 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 SNTA1Q13424 505 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 RUNX2Q13950 521 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 ADCK5Q3MIX3 580 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 ZNF672Q499Z4 452 aaPredicted RBP3.79□□□□□ -1.8
MDM2-227ENST00000540709 CBWD5Q5RIA9 395 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 OTUD3Q5T2D3 398 aaPredicted RBP3.79□□□□□ -1.8
MDM2-227ENST00000540709 GJB7Q6PEY0 223 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 CCDC105Q8IYK2 499 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 GDPD5Q8WTR4 605 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 TRAPPC12Q8WVT3 735 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 TRIB2Q92519 343 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 NR4A3Q92570 626 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 DDX31Q9H8H2 851 aaKnown RBP3.79□□□□□ -1.8
MDM2-227ENST00000540709 DONSONQ9NYP3 566 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 OR6C3Q9NZP0 311 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 NFS1Q9Y697 457 aa3.79□□□□□ -1.8
MDM2-227ENST00000540709 CKAP5Q14008 2032 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 IGLV5-37A0A075B6J1 123 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 CYSRT1A8MQ03 144 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 PEX12O00623 359 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 KRT86O43790 486 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 DHX16O60231 1041 aaKnown RBP3.78□□□□□ -1.8
MDM2-227ENST00000540709 GAS8-AS1O95177 125 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 DAOP14920 347 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 SSTR2P30874 369 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 ACTR2P61160 394 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 SLC18A2Q05940 514 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 FAM27E3Q08E93 113 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 OS9Q13438 667 aaPredicted RBP3.78□□□□□ -1.8
MDM2-227ENST00000540709 DHX34Q14147 1143 aaKnown RBP3.78□□□□□ -1.8
MDM2-227ENST00000540709 MORC3Q14149 939 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 KRT81Q14533 505 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 RPE65Q16518 533 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 SLC18A3Q16572 532 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 EDRF1Q3B7T1 1238 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 CTXN3Q4LDR2 81 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 DCAF6Q58WW2 860 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 IL20RBQ6UXL0 311 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 MOGAT3Q86VF5 341 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 DENND6AQ8IWF6 608 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 FTSJ3Q8IY81 847 aaKnown RBP3.78□□□□□ -1.8
MDM2-227ENST00000540709 ENAHQ8N8S7 591 aaPredicted RBP3.78□□□□□ -1.8
MDM2-227ENST00000540709 THAP4Q8WY91 577 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 CCT6BQ92526 530 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 IFT80Q9P2H3 777 aaPredicted RBP3.78□□□□□ -1.8
MDM2-227ENST00000540709 DNAJC16Q9Y2G8 782 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 RIPOR2Q9Y4F9 1068 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 PCDHAC2Q9Y5I4 1007 aa3.78□□□□□ -1.8
MDM2-227ENST00000540709 CCDC194A0A1B0GVG4 234 aa3.77□□□□□ -1.81
MDM2-227ENST00000540709 B9A039 149 aa3.77□□□□□ -1.81
MDM2-227ENST00000540709 J3KR12 359 aa3.77□□□□□ -1.81
MDM2-227ENST00000540709 SOCS5O75159 536 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms