RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 STYXL1Q9Y6J8 313 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 COL14A1Q05707 1796 aaKnown RBP13.13□□□□□ -0.31
DNMT1-203ENST00000540357 PTGES3LE9PB15 166 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 S100A1P23297 94 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 LHX1P48742 406 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 TRIM60Q495X7 471 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 SIAH1Q8IUQ4 282 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 FNDC5Q8NAU1 212 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 OR6J1Q8NGC5 347 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 OR56A4Q8NGH8 313 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 PDGFCQ9NRA1 345 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 A0A0J9YYE9 177 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 FAM20BO75063 409 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 MED26O95402 600 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF132P52740 706 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 TMEM62Q0P6H9 643 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 MAPK11Q15759 364 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 FSCN1Q16658 493 aaKnown RBP13.13□□□□□ -0.31
DNMT1-203ENST00000540357 PERM1Q5SV97 790 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 CERCAMQ5T4B2 595 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 PLPPR4Q7Z2D5 763 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 AFG1LQ8WV93 481 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 OR52B2Q96RD2 323 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 EPB41L1Q9H4G0 881 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 GIN1Q9NXP7 522 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 IGSF9Q9P2J2 1179 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 TJP2Q9UDY2 1190 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 CACNA1SQ13698 1873 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 YDJCA8MPS7 323 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 H0YJX3 145 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 IPO13O94829 963 aaKnown RBP13.13□□□□□ -0.31
DNMT1-203ENST00000540357 INSRRP14616 1297 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 CHRM3P20309 590 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 MAD2L1Q13257 205 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-203ENST00000540357 GRM3Q14832 879 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 DPYSL2Q16555 572 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 CCNYL2Q5T2Q4 361 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 EEF1DP3Q658K8 133 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 FAM45BPQ6NSW5 357 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 C15orf39Q6ZRI6 1047 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 SPPL2CQ8IUH8 684 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 FAM126BQ8IXS8 530 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 SMYD1Q8NB12 490 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 FAM45AQ8TCE6 357 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 SIGLEC10Q96LC7 697 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 NDEL1Q9GZM8 345 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 HIPK3Q9H422 1215 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 NOL6Q9H6R4 1146 aaKnown RBP13.13□□□□□ -0.31
DNMT1-203ENST00000540357 LIMD1Q9UGP4 676 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-203ENST00000540357 ECM29Q5VYK3 1845 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF541Q9H0D2 1346 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 MYL3P08590 195 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 ERCC2P18074 760 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 TRAF3Q13114 568 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 ZIK1Q3SY52 487 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 RSBN1Q5VWQ0 802 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 SLC9A4Q6AI14 798 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 IL31Q6EBC2 164 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 TTC30BQ8N4P2 665 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 TRAPPC12Q8WVT3 735 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 YTHDF1Q9BYJ9 559 aaKnown RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 EGFL7Q9UHF1 273 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 C3orf18Q9UK00 162 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 TDRKHQ9Y2W6 561 aaKnown RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 CAB39Q9Y376 341 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 PNMA8CA0A1B0GUJ8 204 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 NCF1BA6NI72 391 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 NCF1CA8MVU1 366 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 SYNCRIPO60506 623 aaKnown RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 NCF1P14598 390 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 GPD2P43304 727 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 RPS9P46781 194 aaKnown RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 GLUD2P49448 558 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 FSTL1Q12841 308 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 PKN3Q6P5Z2 889 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 C1orf127Q8N9H9 656 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 POP5Q969H6 163 aaKnown RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 BIRC8Q96P09 236 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 KLK14Q9P0G3 267 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 GNPTGQ9UJJ9 305 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 CNOT6Q9ULM6 557 aaKnown RBP13.12□□□□□ -0.31
DNMT1-203ENST00000540357 CYP2C18P33260 490 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 CAPGP40121 348 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 MAGEA8P43361 318 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 CTBP1Q13363 440 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 MYLK3Q32MK0 819 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 GALNT18Q6P9A2 607 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 TRAF7Q6Q0C0 670 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF567Q8N184 647 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 FAM156AQ8NDB6 213 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 DNAJB14Q8TBM8 379 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 HSPBAP1Q96EW2 488 aa13.12□□□□□ -0.31
DNMT1-203ENST00000540357 SPON2Q9BUD6 331 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms