RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PIEZO1Q92508 2521 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TP73O15350 636 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 INSIG1O15503 277 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SEC31AO94979 1220 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 IGSF6O95976 241 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GSRP00390 522 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PRKCHP24723 683 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TARSP26639 723 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SNRPD1P62314 119 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SKOR1P84550 965 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ENPP2Q13822 863 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CCINQ13939 588 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 HNRNPA1L2Q32P51 320 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 RNASEH2BQ5TBB1 312 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 DPY19L3Q6ZPD9 716 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SRLQ86TD4 932 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 KLHDC8BQ8IXV7 354 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 OR2A12Q8NGT7 310 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PTPRN2Q92932 1015 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 VOPP1Q96AW1 172 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TADA1Q96BN2 335 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GDAP1L1Q96MZ0 367 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SCUBE2Q9NQ36 999 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GDF3Q9NR23 364 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 EVLQ9UI08 416 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 STON1Q9Y6Q2 735 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CACNA1IQ9P0X4 2223 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SHROOM3Q8TF72 1996 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 MYO15AQ9UKN7 3530 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TCRBV7S3A2A0A539 114 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TARSL2A2RTX5 802 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PI15O43692 258 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 AOC1P19801 751 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GKP32189 559 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 WASP42768 502 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CSNK1DP48730 415 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ITGA8P53708 1063 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TCF15Q12870 199 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PRPSAP1Q14558 356 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 C2orf27AQ580R0 203 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ANKRD22Q5VYY1 191 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 KCTD11Q693B1 232 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NCEH1Q6PIU2 408 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PLPP6Q8IY26 295 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CHPFQ8IZ52 775 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PDCD7Q8N8D1 485 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NAT8LQ8N9F0 302 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PRRX2Q99811 253 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 WHRNQ9P202 907 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FAM153AQ9UHL3 310 aa19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FARP1Q9Y4F1 1045 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1A-213ENST00000540022 KANSL1LA0AUZ9 987 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 E7EVH7 732 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 NPC1O15118 1278 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ANXA9O76027 345 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TMEM63AO94886 807 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 APRTP07741 180 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SERPINF2P08697 491 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ITIH2P19823 946 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CES1P23141 567 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MAGEA6P43360 314 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CCNHP51946 323 aaPredicted RBP19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GEMP55040 296 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 NHLH1Q02575 133 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 FZD5Q13467 585 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 KCNJ11Q14654 390 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MYLK3Q32MK0 819 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 FBXO43Q4G163 708 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 KDELC1Q6UW63 502 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PPIL6Q8IXY8 311 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 RYBPQ8N488 228 aaPredicted RBP19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 IL17RCQ8NAC3 791 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CHST14Q8NCH0 376 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MYRIPQ8NFW9 859 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 KCNV2Q8TDN2 545 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 LTB4R2Q9NPC1 389 aa19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 AAR2Q9Y312 384 aaKnown RBP19.14■□□□□ 0.65
TNFRSF1A-213ENST00000540022 VPS13AQ96RL7 3174 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MUC22E2RYF6 1773 aaPredicted RBP19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 EDDM13A0A1B0GTR0 161 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 RNF40O75150 1001 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PMPCBO75439 489 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 RECQLP46063 649 aaPredicted RBP19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CARSP49589 748 aaKnown RBP19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 AP1S1P61966 158 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 OLIG2Q13516 323 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SPARCL1Q14515 664 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 UBXN2BQ14CS0 331 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 E2F5Q15329 346 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 RALGPS1Q5JS13 557 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 C9orf64Q5T6V5 341 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 HIBCHQ6NVY1 386 aaPredicted RBP19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ZDHHC24Q6UX98 284 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PCGF5Q86SE9 256 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 BBOF1Q8ND07 529 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SHDQ96IW2 340 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PPP1R2P1Q96PQ5 205 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 VPS45Q9NRW7 570 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 FAM114A2Q9NRY5 505 aa19.13■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ANAPC5Q9UJX4 755 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms