RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 HLA-DQB2P05538 268 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 CXCR5P32302 372 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 HSPA9P38646 679 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 ATP5OP48047 213 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 IFI35P80217 286 aaPredicted RBP12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 ITKQ08881 620 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 SFSWAPQ12872 951 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 XRCC4Q13426 336 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 LPAL2Q16609 132 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 PLK5Q496M5 336 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 NCEH1Q6PIU2 408 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 SLC36A4Q6YBV0 504 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 ADAT2Q7Z6V5 191 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 SLC13A5Q86YT5 568 aaPredicted RBP12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 TMEFF1Q8IYR6 380 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 LRIG1Q96JA1 1093 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 KLHL32Q96NJ5 620 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 QKIQ96PU8 341 aaKnown RBP eCLIP12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 NUDCD1Q96RS6 583 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 GPR174Q9BXC1 333 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 OSBPL1AQ9BXW6 950 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 CPEB1Q9BZB8 566 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 BTBD1Q9H0C5 482 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 DYRK4Q9NR20 520 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 KCND1Q9NSA2 647 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 FZD4Q9ULV1 537 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 R3HDM2Q9Y2K5 976 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 ATP8A1Q9Y2Q0 1164 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 CEP104O60308 925 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 NEBLO76041 1014 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 RBP3P10745 1247 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 ITGB7P26010 798 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 MSNP26038 577 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 RBL1P28749 1068 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 EIF3EP60228 445 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 GNG11P61952 73 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 FOXK2Q01167 660 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 DSC2Q02487 901 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 RPL6Q02878 288 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 SLC45A4Q5BKX6 768 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 ZNF805Q5CZA5 627 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 PIP5KL1Q5T9C9 394 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 AGBL4Q5VU57 503 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 PMS2CLQ68D20 193 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 ERN2Q76MJ5 926 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 PARS2Q7L3T8 475 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 C11orf74Q86VG3 221 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 CAMK1DQ8IU85 385 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 CNTD1Q8N815 330 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 FAM131CQ96AQ9 280 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 PPP1R16AQ96I34 528 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 ZC3H10Q96K80 434 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 SEMA3CQ99985 751 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 POLR1EQ9GZS1 481 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 SUV39H2Q9H5I1 410 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 SGK2Q9HBY8 427 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 NOD2Q9HC29 1040 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 AMACRQ9UHK6 382 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 TTLL3Q9Y4R7 772 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 NUMA1Q14980 2115 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 ABCA7Q8IZY2 2146 aa12.86□□□□□ -0.35
TSPAN9-207ENST00000539631 PLXNA2O75051 1894 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 FAM47DPA6NHR8 397 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 C16orf96A6NNT2 1141 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 SEMA4FO95754 770 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 PTPN3P26045 913 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 NEK3P51956 506 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 ADPRHP54922 357 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 TAS2R38P59533 333 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 AP1S1P61966 158 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 BCL2L1Q07817 233 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 WASHC5Q12768 1159 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 GRM3Q14832 879 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 TEX44Q53QW1 395 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 ARMCX6Q7L4S7 300 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 LPCAT2Q7L5N7 544 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 CDKL3Q8IVW4 592 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 SUMF1Q8NBK3 374 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 OR14C36Q8NHC7 312 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 HTR3CQ8WXA8 447 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 AGAP3Q96P47 875 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 TUBGCP5Q96RT8 1024 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 HDAC8Q9BY41 377 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 C6orf106Q9H6K1 298 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 ATP13A3Q9H7F0 1226 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 SMG5Q9UPR3 1016 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 PCDHGC4Q9Y5F7 938 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 SPAG17Q6Q759 2223 aa12.85□□□□□ -0.35
TSPAN9-207ENST00000539631 LRRK1Q38SD2 2015 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 PRR23AA6NEV1 266 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 PROB1E7EW31 1015 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 TRAFD1O14545 582 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 SLC7A4O43246 635 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 PLRG1O43660 514 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 RHOBTB1O94844 696 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms