RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 DDHD2O94830 711 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 HMBSP08397 361 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 HAPLN1P10915 354 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-210ENST00000539599 STMN1P16949 149 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 THPOP40225 353 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 HCAR3P49019 387 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 RALGDSQ12967 914 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 PCID2Q5JVF3 399 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 CLEC6AQ6EIG7 209 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 LILRA2Q8N149 483 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 BHLHE22Q8NFJ8 381 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-210ENST00000539599 OR9I1Q8NGQ6 314 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 PABPC5Q96DU9 382 aaKnown RBP14.22□□□□□ -0.13
UBE3B-210ENST00000539599 RTKNQ9BST9 563 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 PCDHAC1Q9H158 963 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 NT5MQ9NPB1 228 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 ABI2Q9NYB9 513 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-210ENST00000539599 HS3ST4Q9Y661 456 aa14.22□□□□□ -0.13
UBE3B-210ENST00000539599 PPP6CO00743 305 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 PRSS56P0CW18 603 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 GRK4P32298 578 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 KCNC1P48547 511 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 C1QTNF8P60827 252 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 CYLC2Q14093 348 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-210ENST00000539599 PITRM1Q5JRX3 1037 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 BTBD8Q5XKL5 378 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 GALNT4Q8N4A0 578 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 KDM1BQ8NB78 822 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 HMGCLL1Q8TB92 370 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 FAM110BQ8TC76 370 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 TSNARE1Q96NA8 513 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 KLHL32Q96NJ5 620 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 SLC39A3Q9BRY0 314 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 DMAP1Q9NPF5 467 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-210ENST00000539599 PADI3Q9ULW8 664 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 CDYLQ9Y232 598 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 TCAF1Q9Y4C2 921 aa14.21□□□□□ -0.13
UBE3B-210ENST00000539599 A0A1B0GTW7 788 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 M0QZ92 97 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 SLC4A1P02730 911 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 VCLP18206 1134 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 ARSDP51689 593 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 DSC2Q02487 901 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 SLC10A7Q0GE19 358 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 FLOT2Q14254 428 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 PCBP1Q15365 356 aaKnown RBP eCLIP14.21□□□□□ -0.14
UBE3B-210ENST00000539599 MMEL1Q495T6 779 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 TRIM67Q6ZTA4 783 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 NOL6Q9H6R4 1146 aaKnown RBP14.21□□□□□ -0.14
UBE3B-210ENST00000539599 FBRSL1Q9HCM7 1045 aaKnown RBP14.21□□□□□ -0.14
UBE3B-210ENST00000539599 CSNK1G1Q9HCP0 422 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 PAPOLBQ9NRJ5 636 aaKnown RBP14.21□□□□□ -0.14
UBE3B-210ENST00000539599 TRPV2Q9Y5S1 764 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 PTCH2Q9Y6C5 1203 aa14.21□□□□□ -0.14
UBE3B-210ENST00000539599 ZNF236Q9UL36 1845 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 LRRC14BA6NHZ5 514 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 ERI2A8K979 691 aaKnown RBP14.2□□□□□ -0.14
UBE3B-210ENST00000539599 DNAJA2O60884 412 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 F9P00740 461 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 FGFR3P22607 806 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 YWHAQP27348 245 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 PPARGP37231 505 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-210ENST00000539599 CD86P42081 329 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 TLR1Q15399 786 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 TAF1CQ15572 869 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-210ENST00000539599 ALFQ53S48 1182 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 PIK3R6Q5UE93 754 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 OVOS1Q6IE37 1185 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 TMEM86AQ8N2M4 240 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 KYQ8NBH2 561 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 PPHLN1Q8NEY8 458 aaKnown RBP14.2□□□□□ -0.14
UBE3B-210ENST00000539599 GBP5Q96PP8 586 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 ARHGAP39Q9C0H5 1083 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 SEMA6AQ9H2E6 1030 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 SLC38A7Q9NVC3 462 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 MARCH4Q9P2E8 410 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-210ENST00000539599 FBXO5Q9UKT4 447 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 CRYL1Q9Y2S2 319 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 RGSL1A5PLK6 1076 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 E9PAM4 449 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 CABYRO75952 493 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 ATP5BP06576 529 aaKnown RBP14.2□□□□□ -0.14
UBE3B-210ENST00000539599 NELFEP18615 380 aaKnown RBP14.2□□□□□ -0.14
UBE3B-210ENST00000539599 PCSK1P29120 753 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 ALDH1A3P47895 512 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 WNT3AP56704 352 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 USP46P62068 366 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 ZNF423Q2M1K9 1284 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 SLC39A12Q504Y0 691 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 FAM171BQ6P995 826 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 AAGABQ6PD74 315 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 TMEM207Q6UWW9 146 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 RYBPQ8N488 228 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-210ENST00000539599 PPP2R3CQ969Q6 453 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 MYEOVQ96EZ4 313 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 SMIM14Q96QK8 99 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 TRIM8Q9BZR9 551 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 SENP6Q9GZR1 1112 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-210ENST00000539599 WDR41Q9HAD4 459 aa14.2□□□□□ -0.14
UBE3B-210ENST00000539599 IGSF5Q9NSI5 407 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms