RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 C1QTNF8P60827 252 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 SLC12A1Q13621 1099 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 LAMC2Q13753 1193 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ZNF484Q5JVG2 852 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 KRT80Q6KB66 452 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 TMEM126BQ8IUX1 230 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 CNTD1Q8N815 330 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 BEST2Q8NFU1 509 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ASB9Q96DX5 294 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 GBA3Q9H227 469 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ATXN3LQ9H3M9 355 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 RHOJQ9H4E5 214 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ATP6AP2A0A1C7CYW4 349 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ZNF839A8K0R7 811 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ATP6AP2O75787 350 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 NOS2P35228 1153 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ADRA1BP35368 520 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ETFBP38117 255 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ACADSBP45954 432 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ARHGAP1Q07960 439 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ESRP1Q6NXG1 681 aaKnown RBP20.51■□□□□ 0.87
TMEM260-203ENST00000539559 ARHGAP36Q6ZRI8 547 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 WNT8BQ93098 351 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 GPR78Q96P69 363 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 CHST12Q9NRB3 414 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 VTI1BQ9UEU0 232 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 TDRKHQ9Y2W6 561 aaKnown RBP20.51■□□□□ 0.87
TMEM260-203ENST00000539559 DAB1O75553 588 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 FYNP06241 537 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 HSPA13P48723 471 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 NME5P56597 212 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 MAP3K7CLP57077 242 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 DCTN2Q13561 401 aaKnown RBP20.5■□□□□ 0.87
TMEM260-203ENST00000539559 ZBTB6Q15916 424 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 TRIM67Q6ZTA4 783 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 CRYBG2Q8N1P7 616 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 C2orf69Q8N8R5 385 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 ITFG2Q969R8 447 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 HSFY1Q96LI6 401 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 LRRC4Q9HBW1 653 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 OLAHQ9NV23 265 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 FAM95CA0A1B0GW59 222 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 CAPNS1P04632 268 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 APOA4P06727 396 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 SOX4Q06945 474 aaPredicted RBP20.5■□□□□ 0.87
TMEM260-203ENST00000539559 HERC3Q15034 1050 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 REP15Q6BDI9 236 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 SMYD5Q6GMV2 418 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 IFNLR1Q8IU57 520 aaPredicted RBP20.5■□□□□ 0.87
TMEM260-203ENST00000539559 HEXDCQ8WVB3 486 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 ELMO2Q96JJ3 720 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 ZNF597Q96LX8 424 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 RNF39Q9H2S5 420 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 IL1RL2Q9HB29 575 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 CACNA2D2Q9NY47 1150 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 MID2Q9UJV3 735 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 SAC3D1A6NKF1 404 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 YJEFN3A6XGL0 299 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 C9JVG2 144 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 H6PDO95479 791 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 GNAO1P09471 354 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 CSRP3P50461 194 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 TAS2R39P59534 338 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 SULT2A1Q06520 285 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 EDEM1Q92611 657 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 VTA1Q9NP79 307 aa20.5■□□□□ 0.87
TMEM260-203ENST00000539559 SOCS2O14508 198 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 ZNF23P17027 643 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 RPL34P49207 117 aaKnown RBP20.49■□□□□ 0.87
TMEM260-203ENST00000539559 TKTL1P51854 596 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 FASTKQ14296 549 aaKnown RBP20.49■□□□□ 0.87
TMEM260-203ENST00000539559 CSHL1Q14406 222 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 RFTN1Q14699 578 aaPredicted RBP20.49■□□□□ 0.87
TMEM260-203ENST00000539559 KLHL35Q6PF15 583 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 CATSPER4Q7RTX7 472 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 CARM1Q86X55 608 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 SIX6OS1Q8N1H7 587 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 FAM47BQ8NA70 645 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 IPMKQ8NFU5 416 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 RDH11Q8TC12 318 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 SPPL2BQ8TCT7 592 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 PHF21BQ96EK2 531 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 LRCH3Q96II8 777 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 DCUN1D5Q9BTE7 237 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 FBRSL1Q9HCM7 1045 aaKnown RBP20.49■□□□□ 0.87
TMEM260-203ENST00000539559 CNOT6Q9ULM6 557 aaKnown RBP20.49■□□□□ 0.87
TMEM260-203ENST00000539559 FAM149AA5PLN7 773 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 SEC24DO94855 1032 aaPredicted RBP20.49■□□□□ 0.87
TMEM260-203ENST00000539559 YWHAQP27348 245 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 LPIN1Q14693 890 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 B3GALNT2Q8NCR0 500 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 APPL2Q8NEU8 664 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 OSMRQ99650 979 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 MED10Q9BTT4 135 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 ULBP1Q9BZM6 244 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 EBF1Q9UH73 591 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 ANKRD6Q9Y2G4 727 aa20.49■□□□□ 0.87
TMEM260-203ENST00000539559 MTF2Q9Y483 593 aaPredicted RBP20.49■□□□□ 0.87
TMEM260-203ENST00000539559 H3BNH8 94 aa20.48■□□□□ 0.87
TMEM260-203ENST00000539559 TPST1O60507 370 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms