RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SNRNP25Q9BV90 132 aaKnown RBP19.34■□□□□ 0.69
TNFRSF1A-212ENST00000539372 OSBPL1AQ9BXW6 950 aa19.34■□□□□ 0.69
TNFRSF1A-212ENST00000539372 EDEM3Q9BZQ6 932 aa19.34■□□□□ 0.69
TNFRSF1A-212ENST00000539372 KLHL11Q9NVR0 708 aa19.34■□□□□ 0.69
TNFRSF1A-212ENST00000539372 COL5A1P20908 1838 aaPredicted RBP19.33■□□□□ 0.69
TNFRSF1A-212ENST00000539372 POM121BA6NF01 834 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 A6NNZ2 444 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 INSIG1O15503 277 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SPINT1O43278 529 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TSPAN6O43657 245 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 IGSF6O95976 241 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 MIPP30301 263 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CLDN6P56747 220 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TPM4P67936 248 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SGCGQ13326 291 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CYTH1Q15438 398 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 INO80DQ53TQ3 878 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TTC7BQ86TV6 843 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 GALNT15Q8N3T1 639 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CASKIN2Q8WXE0 1202 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 RAB7BQ96AH8 199 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 LRRC19Q9H756 370 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 UCKL1Q9NWZ5 548 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 UBA2Q9UBT2 640 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 HS3ST3A1Q9Y663 406 aa19.33■□□□□ 0.68
TNFRSF1A-212ENST00000539372 J3KR12 359 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TAF4O00268 1085 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TRIM38O00635 465 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 DAPK3O43293 454 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PRPSAP2O60256 369 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 RFPL3O75679 317 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 RNF8O76064 485 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CAPNS1P04632 268 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 HTR7P34969 479 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ACADVLP49748 655 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 RAD51Q06609 339 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SMAD1Q15797 465 aaKnown RBP19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TDRD12Q587J7 1177 aaKnown RBP19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ZNF542PQ5EBM4 170 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PPP6R3Q5H9R7 873 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 KDM7AQ6ZMT4 941 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 RFX8Q6ZV50 586 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CYP4V2Q6ZWL3 525 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SLC25A45Q8N413 288 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 MDM1Q8TC05 714 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.32■□□□□ 0.686e-7■□□□□ 9.6
TNFRSF1A-212ENST00000539372 C1QTNF2Q9BXJ5 285 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SLC39A8Q9C0K1 460 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 LHX3Q9UBR4 397 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PCDHGA1Q9Y5H4 931 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TRPM6Q9BX84 2022 aa19.32■□□□□ 0.68
TNFRSF1A-212ENST00000539372 FFAR2O15552 330 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PIGNO95427 931 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ITIH2P19823 946 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 DGKAP23743 735 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 UBASH3AP57075 661 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 FIGNQ5HY92 759 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 KYAT3Q6YP21 454 aaKnown RBP19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 FNIP1Q8TF40 1166 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CPLX3Q8WVH0 158 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TSC1Q92574 1164 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 KLF6Q99612 283 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 NCAPGQ9BPX3 1015 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CCDC86Q9H6F5 360 aaKnown RBP19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PDFQ9HBH1 243 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 DNAJC28Q9NX36 388 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 RALYQ9UKM9 306 aaKnown RBP19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SCINQ9Y6U3 715 aa19.31■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CFAP47Q6ZTR5 3102 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 EIF3CLB5ME19 914 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 FPGTO14772 594 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 AREL1O15033 823 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SIGLEC6O43699 453 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PRAMEF11O60813 436 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 LRCH4O75427 683 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 MYBL1P10243 752 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TIMP2P16035 220 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ERCC2P18074 760 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PBX1P40424 430 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PAPOLAP51003 745 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 NDST2P52849 883 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 HGSNATQ68CP4 663 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PROSER1Q86XN7 944 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 FAM174AQ8TBP5 190 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ARHGEF26Q96DR7 871 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TRIM11Q96F44 468 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 EIF3CQ99613 913 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ISCUQ9H1K1 167 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 DONSONQ9NYP3 566 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 MFHAS1Q9Y4C4 1052 aa19.3■□□□□ 0.68
TNFRSF1A-212ENST00000539372 A0A1W2PQJ5 194 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ARHGAP42A6NI28 874 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 GOLGA6L19H0YKK7 550 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 DFFAO00273 331 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 MMP20O60882 483 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PIAS2O75928 621 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 C1SP09871 688 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CKMT2P17540 419 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 RABIFP47224 123 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 FZD2Q14332 565 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms