RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 ADRB3P13945 408 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 HSPA9P38646 679 aaKnown RBP15.2■□□□□ 0.02
PRPF19-203ENST00000539180 PEX5P50542 639 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 CCR5P51681 352 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 ADCY2Q08462 1091 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 NSUN2Q08J23 767 aaKnown RBP eCLIP15.2■□□□□ 0.02
PRPF19-203ENST00000539180 SF3A2Q15428 464 aaKnown RBP15.2■□□□□ 0.02
PRPF19-203ENST00000539180 IFI16Q16666 785 aaKnown RBP15.2■□□□□ 0.02
PRPF19-203ENST00000539180 SYCP2LQ5T4T6 812 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 ALG1LQ6GMV1 187 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 SLC23A3Q6PIS1 610 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 TRIM69Q86WT6 500 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 RYBPQ8N488 228 aaPredicted RBP15.2■□□□□ 0.02
PRPF19-203ENST00000539180 OR14C36Q8NHC7 312 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 KIAA1524Q8TCG1 905 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 ALG3Q92685 438 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 RBM41Q96IZ5 413 aaKnown RBP15.2■□□□□ 0.02
PRPF19-203ENST00000539180 TUBGCP5Q96RT8 1024 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 TSGA10Q9BZW7 698 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 EBF2Q9HAK2 575 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 CAPN10Q9HC96 672 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 PREBQ9HCU5 417 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 TPX2Q9ULW0 747 aaKnown RBP15.2■□□□□ 0.02
PRPF19-203ENST00000539180 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.2■□□□□ 0.02
PRPF19-203ENST00000539180 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.2■□□□□ 0.02
PRPF19-203ENST00000539180 TMEM131Q92545 1883 aa15.2■□□□□ 0.02
PRPF19-203ENST00000539180 GON4LQ3T8J9 2241 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 CCDC66A2RUB6 948 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 AP1G1O43747 822 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 MX2P20592 715 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 CCNCP24863 283 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 CD27P26842 260 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 MAOBP27338 520 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 PTPN7P35236 360 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 RAD51Q06609 339 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 PPIDQ08752 370 aaKnown RBP15.19■□□□□ 0.02
PRPF19-203ENST00000539180 HNRNPDQ14103 355 aaKnown RBP15.19■□□□□ 0.02
PRPF19-203ENST00000539180 ZNF235Q14590 738 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 GRM3Q14832 879 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 TRIM61Q5EBN2 209 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 TFDP3Q5H9I0 405 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 TIGD7Q6NT04 549 aaPredicted RBP15.19■□□□□ 0.02
PRPF19-203ENST00000539180 NPNTQ6UXI9 565 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 GDPD4Q6W3E5 623 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 RABEPKQ7Z6M1 372 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 RFX6Q8HWS3 928 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 KIAA2013Q8IYS2 634 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 ZCCHC9Q8N567 271 aaKnown RBP15.19■□□□□ 0.02
PRPF19-203ENST00000539180 RNF10Q8N5U6 811 aaKnown RBP15.19■□□□□ 0.02
PRPF19-203ENST00000539180 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.19■□□□□ 0.02
PRPF19-203ENST00000539180 ECHDC3Q96DC8 303 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 KLHL32Q96NJ5 620 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 HERPUD2Q9BSE4 406 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 DYRK4Q9NR20 520 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 RXFP3Q9NSD7 469 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 DKK3Q9UBP4 350 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 SUSD2Q9UGT4 822 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 EIF2B4Q9UI10 523 aaKnown RBP15.19■□□□□ 0.02
PRPF19-203ENST00000539180 FADS3Q9Y5Q0 445 aa15.19■□□□□ 0.02
PRPF19-203ENST00000539180 A0A1W2PPC4 97 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 FAM47DPA6NHR8 397 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 C16orf96A6NNT2 1141 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 AREL1O15033 823 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 MATN3O15232 486 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 FSBPO95073 299 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 ZRANB2O95218 330 aaKnown RBP eCLIP15.18■□□□□ 0.02
PRPF19-203ENST00000539180 SERPINF2P08697 491 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 CCDC175P0C221 793 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 KRT10P13645 584 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 PECAM1P16284 738 aaPredicted RBP15.18■□□□□ 0.02
PRPF19-203ENST00000539180 ZFXP17010 805 aaPredicted RBP15.18■□□□□ 0.02
PRPF19-203ENST00000539180 TGM2P21980 687 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 MMP13P45452 471 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 MAPK8P45983 427 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 RENBPP51606 427 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 NAP1L1P55209 391 aaKnown RBP15.18■□□□□ 0.02
PRPF19-203ENST00000539180 AP1S1P61966 158 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 LMNB2Q03252 620 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 DUOXA1Q1HG43 343 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 TMEM259Q4ZIN3 620 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 NEK5Q6P3R8 708 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 SRLQ86TD4 932 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 ZSWIM9Q86XI8 627 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 RCOR2Q8IZ40 523 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 RGL4Q8IZJ4 473 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 SYCE1Q8N0S2 351 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 CEP76Q8TAP6 659 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 SPOCK2Q92563 424 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 RAB7BQ96AH8 199 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 ZNF830Q96NB3 372 aaPredicted RBP15.18■□□□□ 0.02
PRPF19-203ENST00000539180 NUDCD1Q96RS6 583 aa15.18■□□□□ 0.02
PRPF19-203ENST00000539180 TRPM6Q9BX84 2022 aa15.17■□□□□ 0.02
PRPF19-203ENST00000539180 CEP250Q9BV73 2442 aa15.17■□□□□ 0.02
PRPF19-203ENST00000539180 A0A1B0GTW7 788 aa15.17■□□□□ 0.02
PRPF19-203ENST00000539180 MIF4GDA9UHW6 222 aaKnown RBP15.17■□□□□ 0.02
PRPF19-203ENST00000539180 TRAFD1O14545 582 aaPredicted RBP15.17■□□□□ 0.02
PRPF19-203ENST00000539180 KHNYNO15037 678 aaKnown RBP15.17■□□□□ 0.02
PRPF19-203ENST00000539180 DDX3YO15523 660 aaKnown RBP15.17■□□□□ 0.02
PRPF19-203ENST00000539180 KRT86O43790 486 aa15.17■□□□□ 0.02
PRPF19-203ENST00000539180 CST8O60676 142 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms