RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828		A0A1W2PQ67	120 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TSPAN11	A1L157	253 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CFAP69	A5D8W1	941 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TLR4	O00206	839 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TOR1B	O14657	336 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	AREL1	O15033	823 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TRIM16	O95361	564 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	LCA5L	O95447	670 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HNRNPA2B1	P22626	353 aa	Known RBP	12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PML	P29590	882 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NUMB	P49757	651 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CCT8	P50990	548 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PAPOLA	P51003	745 aa	Known RBP	12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ARSE	P51690	589 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HADHB	P55084	474 aa	Known RBP	12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PPP2CB	P62714	309 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PPP2CA	P67775	309 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CYTH1	Q15438	398 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZNF284	Q2VY69	593 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	INAVA	Q3KP66	663 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	BRAT1	Q6PJG6	821 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TMCO3	Q6UWJ1	677 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GDPD4	Q6W3E5	623 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZNF354C	Q86Y25	554 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CCDC170	Q8IYT3	715 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RFFL	Q8WZ73	363 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CALR3	Q96L12	384 aa	Known RBP	12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SLC6A18	Q96N87	628 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PSKH2	Q96QS6	385 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ELF4	Q99607	663 aa	Predicted RBP	12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CHP1	Q99653	195 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZNF670	Q9BS34	389 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZDHHC6	Q9H6R6	413 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GDF3	Q9NR23	364 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	LHX3	Q9UBR4	397 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SNX11	Q9Y5W9	270 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SLCO1B1	Q9Y6L6	691 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828	C16orf96	A6NNT2	1141 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KRIT1	O00522	736 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CBFA2T3	O75081	653 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FECH	P22830	423 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	IL4R	P24394	825 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	AKT2	P31751	481 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SLC1A1	P43005	524 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ADK	P55263	362 aa	Known RBP	12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NXPH1	P58417	271 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	STAT4	Q14765	748 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KCNT1	Q5JUK3	1230 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	LRRC38	Q5VT99	294 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PSAPL1	Q6NUJ1	521 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PARS2	Q7L3T8	475 aa	Known RBP	12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ABI3BP	Q7Z7G0	1075 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NPW	Q8N729	165 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TC2N	Q8N9U0	490 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	BAHD1	Q8TBE0	780 aa	Predicted RBP	12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FAF2	Q96CS3	445 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CDC6	Q99741	560 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	C1QTNF2	Q9BXJ5	285 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SP110	Q9HB58	689 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	LUC7L	Q9NQ29	371 aa	Known RBP	12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FSCN3	Q9NQT6	498 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	AASDHPPT	Q9NRN7	309 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SEPT3	Q9UH03	358 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	AMACR	Q9UHK6	382 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	IPO11	Q9UI26	975 aa	Known RBP	12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FNDC3A	Q9Y2H6	1198 aa	Known RBP	12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ACTL7A	Q9Y615	435 aa		12.47	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KNTC1	P50748	2209 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828		A0A1W2PQU0	124 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828		J3KR12	359 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PLK4	O00444	970 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PALM	O75781	387 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PCDH8	O95206	1070 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	WNT1	P04628	370 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	UGT2B4	P06133	528 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GRK6	P43250	576 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ARRB1	P49407	418 aa	Predicted RBP	12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CDH6	P55285	790 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	AP1S1	P61966	158 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ELP6	Q0PNE2	266 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PAFAH1B3	Q15102	231 aa	Known RBP	12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	AGER	Q15109	404 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SMTNL2	Q2TAL5	461 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NAXD	Q8IW45	347 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	BBS5	Q8N3I7	341 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RYBP	Q8N488	228 aa	Predicted RBP	12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SLC35G2	Q8TBE7	412 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HSPH1	Q92598	858 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ECHDC3	Q96DC8	303 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KLHL32	Q96NJ5	620 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PANX2	Q96RD6	677 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SLC17A9	Q9BYT1	436 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SUV39H2	Q9H5I1	410 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GPR27	Q9NS67	375 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HAUS2	Q9NVX0	235 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PCOLCE2	Q9UKZ9	415 aa		12.46	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZFR2	Q9UPR6	939 aa	Known RBP	12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms