RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PHF13Q86YI8 300 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 CLYBLQ8N0X4 340 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 TEX47Q8TBZ9 253 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 RCN3Q96D15 328 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SLC9A7Q96T83 725 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 EBNA1BP2Q99848 306 aaKnown RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZNF670Q9BS34 389 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 FBXO44Q9H4M3 255 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ASB7Q9H672 318 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 AGO4Q9HCK5 861 aaKnown RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 ARL8BQ9NVJ2 186 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZNF224Q9NZL3 707 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PNMA8BQ9ULN7 279 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 DHRS7Q9Y394 339 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 TARBP1Q13395 1621 aaKnown RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 LRRIQ1Q96JM4 1722 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 C5orf60A6NFR6 353 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SLC22A1O15245 554 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 CYP2A6P11509 494 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 CXCR2P25025 360 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 OMPP47874 163 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SKP1P63208 163 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 TRIM32Q13049 653 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PRKG2Q13237 762 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ITGA7Q13683 1181 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 NIPAL1Q6NVV3 410 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 NKX2-3Q8TAU0 364 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 FAM151AQ8WW52 585 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SERAC1Q96JX3 654 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZFYVE28Q9HCC9 887 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PRKAG3Q9UGI9 489 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 QSOX1O00391 747 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 PARNO95453 639 aaKnown RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 FGRP09769 529 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 STAG3L1P0CL83 205 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 STXBP5Q5T5C0 1151 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 AFTPHQ6ULP2 937 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 SPESP1Q6UW49 350 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 TMPRSS11AQ6ZMR5 421 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ARHGAP36Q6ZRI8 547 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ZNF572Q7Z3I7 529 aaPredicted RBP6.98□□□□□ -1.29
SORT1-209ENST00000538502 PIGWQ7Z7B1 504 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 DNAJB8Q8NHS0 232 aa6.98□□□□□ -1.29
SORT1-209ENST00000538502 ROBO3Q96MS0 1386 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 FAM240BA0A1B0GVZ2 78 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 BTN3A1O00481 513 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 AVILO75366 819 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 OTCP00480 354 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 IFNA7P01567 189 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 GSTT2BP0CG30 244 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 EPB42P16452 691 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ZNF37AP17032 561 aaPredicted RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 MAPK9P45984 424 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CACNB3P54284 484 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 MARSP56192 900 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 EIF5AP63241 154 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 POU6F1Q14863 301 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CYP2A13Q16696 494 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 MGAT5BQ3V5L5 792 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ACOT1Q86TX2 421 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ALYREFQ86V81 257 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 RNF148Q8N7C7 305 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 PHF10Q8WUB8 498 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 BAP1Q92560 729 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TLCD1Q96CP7 247 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 SERPINB11Q96P15 392 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 SMURF2Q9HAU4 748 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TRPV5Q9NQA5 729 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 PAK6Q9NQU5 681 aaPredicted RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 GPATCH2LQ9NWQ4 482 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TMEM94Q12767 1356 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 RBM47A0AV96 593 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 PLOD3O60568 738 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TFRCP02786 760 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 MYBL2P10244 700 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ITGB6P18564 788 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 AXLP30530 894 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ECT2LQ008S8 904 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 P2RY8Q86VZ1 359 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TRIM48Q8IWZ4 208 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 GJD3Q8N144 294 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 C2orf69Q8N8R5 385 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TAMM41Q96BW9 452 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CENPNQ96H22 339 aaPredicted RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 CLPTM1LQ96KA5 538 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 MCCC1Q96RQ3 725 aaPredicted RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 TSPAN18Q96SJ8 248 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 COG5Q9UP83 839 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ENTPD4Q9Y227 616 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 PLLPQ9Y342 182 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CYB561D2O14569 222 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 PGRP06401 933 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 GLRA2P23416 452 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 RHOAP61586 193 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 MTMR2Q13614 643 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 SWI5Q1ZZU3 235 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CDC42EP5Q6NZY7 148 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TRIM40Q6P9F5 258 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CNSTQ6PJW8 725 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 PTCHD4Q6ZW05 846 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms