RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SNRNP25Q9BV90 132 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NUSAP1Q9BXS6 441 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CXCL16Q9H2A7 254 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 KCND1Q9NSA2 647 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 MRGBPQ9NV56 204 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PCSK1NQ9UHG2 260 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 MUTYHQ9UIF7 546 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 VANGL2Q9ULK5 521 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PHTF1Q9UMS5 762 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 MFHAS1Q9Y4C4 1052 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ADGRG1Q9Y653 693 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 HS3ST4Q9Y661 456 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 STON1Q9Y6Q2 735 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 C3orf70A6NLC5 250 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 GPR89AB7ZAQ6 455 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PGRMC1O00264 195 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ATP8B1O43520 1251 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SRGAP2O75044 1071 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 BEST1O76090 585 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 EPHX1P07099 455 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 GPR89BP0CG08 455 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PCNAP12004 261 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 GOT1P17174 413 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 HTR1BP28222 390 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CSKP41240 450 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CCR2P41597 374 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SKIV2L2P42285 1042 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 MMP13P45452 471 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CLNS1AP54105 237 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ARPC4P59998 168 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 GFPT1Q06210 699 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CAMK2GQ13555 558 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 GTF2H3Q13889 308 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PON2Q15165 354 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ARMC12Q5T9G4 340 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 DPY19L2P1Q6NXN4 242 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CYP2U1Q7Z449 544 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CROCCP2Q86T23 111 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TMEM150AQ86TG1 271 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NLRP8Q86W28 1048 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 WDTC1Q8N5D0 677 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ESX1Q8N693 406 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CEP112Q8N8E3 955 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 C12orf50Q8NA57 414 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 OR2AP1Q8NGE2 309 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CXorf40AQ8TE69 158 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 BTN2A2Q8WVV5 523 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 GAB3Q8WWW8 586 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 HSPH1Q92598 858 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ATOH1Q92858 354 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 FGF14Q92915 247 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NKD2Q969F2 451 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ULK4Q96C45 1275 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 HDAC11Q96DB2 347 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SPDL1Q96EA4 605 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TBATAQ96M53 351 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 RNF157Q96PX1 679 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 MCCC1Q96RQ3 725 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 HDAC8Q9BY41 377 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 RAB17Q9H0T7 212 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 THAP2Q9H0W7 228 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 VCX3BQ9H321 246 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SLC32A1Q9H598 525 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PCDH18Q9HCL0 1135 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 HPS4Q9NQG7 708 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PRDM6Q9NQX0 595 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PRMT8Q9NR22 394 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 RBM12Q9NTZ6 932 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PKD2L2Q9NZM6 624 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 POLG2Q9UHN1 485 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 DMGDHQ9UI17 866 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 DRG1Q9Y295 367 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PPP2R2CQ9Y2T4 447 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ALG6Q9Y672 507 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 A0A087WUV0 522 aaPredicted RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 A0A1W2PRQ8 180 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 MAGEB16A2A368 324 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 WASH3PC4AMC7 463 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 ANKRD65E5RJM6 399 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 MATN3O15232 486 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 TSPAN3O60637 253 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 PRAMEF11O60813 436 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 LRIG2O94898 1065 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 CER1O95813 267 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 IVLP07476 585 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 GJA1P17302 382 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 ERCC2P18074 760 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 KDELR1P24390 212 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 CHRNA3P32297 505 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 RPIAP49247 311 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 FNTAP49354 379 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 SERPINH1P50454 418 aaKnown RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 C21orf59P57076 290 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 IFI35P80217 286 aaPredicted RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 PLOD1Q02809 727 aaPredicted RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 TFF2Q03403 129 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 KDSRQ06136 332 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 ZNF284Q2VY69 593 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 DAB2IPQ5VWQ8 1189 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms