RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 C9orf57Q5W0N0 161 aa11.3□□□□□ -0.6
LINC00346-201ENST00000538077 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
LINC00346-201ENST00000538077 FEM1CQ96JP0 617 aa11.3□□□□□ -0.6
LINC00346-201ENST00000538077 MTMR9Q96QG7 549 aa11.3□□□□□ -0.6
LINC00346-201ENST00000538077 FMN2Q9NZ56 1722 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 RNASEH2AO75792 299 aaKnown RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 LTA4HP09960 611 aaKnown RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 RPL38P63173 70 aaKnown RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 CTBP1Q13363 440 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 PLEKHA7Q6IQ23 1121 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 FAM171BQ6P995 826 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 CYB5D1Q6P9G0 228 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 RFWD3Q6PCD5 774 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 BHLHE22Q8NFJ8 381 aaPredicted RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 TCF25Q9BQ70 676 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 PRRG4Q9BZD6 226 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 EQTNQ9NQ60 294 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 PSMD11O00231 422 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 APODP05090 189 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 SYN1P17600 705 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 CHKAP35790 457 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 CLK3P49761 638 aaKnown RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 DLK2Q6UY11 383 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 UNC5AQ6ZN44 842 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 STK32CQ86UX6 486 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 RAVER1Q8IY67 606 aaKnown RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 KCTD4Q8WVF5 259 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 MCRS1Q96EZ8 462 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 FANCEQ9HB96 536 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 STMN3Q9NZ72 180 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 SNX6Q9UNH7 406 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 NEURL4Q96JN8 1562 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 SIGLEC16A6NMB1 481 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 LRPAP1P30533 357 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 NEK3P51956 506 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 TRIM16LQ309B1 348 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 ZCWPW2Q504Y3 356 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 ARMCX4Q5H9R4 360 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 OR52K2Q8NGK3 314 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 FAM45AQ8TCE6 357 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 CDRT15Q96T59 188 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 TTPALQ9BTX7 342 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 ARHGAP28Q9P2N2 729 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 STK39Q9UEW8 545 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 ASF1AQ9Y294 204 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 UBIAD1Q9Y5Z9 338 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 SPATA31C2B4DYI2 1134 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 RHBDL3P58872 404 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 LPIN1Q14693 890 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 TSNQ15631 228 aaKnown RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 RSBN1Q5VWQ0 802 aaPredicted RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 PACS1Q6VY07 963 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 CHST9Q7L1S5 443 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 ST13P5Q8NFI4 369 aaPredicted RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 HAS1Q92839 578 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 B3GNT5Q9BYG0 378 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 NRDE2Q9H7Z3 1164 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 APOC4-APOC2K7ER74 178 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 STBD1O95210 358 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 APOC2P02655 101 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 MYL12AP19105 171 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 TALDO1P37837 337 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 CYP4F3Q08477 520 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
LINC00346-201ENST00000538077 MAPK11Q15759 364 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 STK40Q8N2I9 435 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 OR14C36Q8NHC7 312 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 RAD51AP1Q96B01 352 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 RHOBTB2Q9BYZ6 727 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 GRIP2Q9C0E4 1043 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 CAB39LQ9H9S4 337 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 THAP1Q9NVV9 213 aa11.29□□□□□ -0.6
LINC00346-201ENST00000538077 LTN1O94822 1766 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 MAGEA13PA6NCF6 341 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SCN2BO60939 215 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SLC35G4P0C7Q5 338 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF143P52747 638 aaPredicted RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 CBX2Q14781 532 aaPredicted RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 NEPROQ6NW34 567 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 GCNT7Q6ZNI0 430 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SH3BP5LQ7L8J4 393 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF605Q86T29 641 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF276Q8N554 614 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 LNX1Q8TBB1 728 aaPredicted RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ANKZF1Q9H8Y5 726 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 GALNT8Q9NY28 637 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SHPRHQ149N8 1683 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 PAGE1O75459 146 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 FARP2O94887 1054 aaPredicted RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 FTH1P02794 183 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SHBGP04278 402 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 CORO1AP31146 461 aaKnown RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 EEF1DP3Q658K8 133 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 RBM43Q6ZSC3 357 aaKnown RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 OR6Y1Q8NGX8 325 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 LINGO1Q96FE5 620 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms