RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ACOT9Q9Y305 439 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 A0A087X1B8 175 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 PHGDHO43175 533 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 STAMBPO95630 424 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 JUNP05412 331 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 NFKB1P19838 968 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 NMBRP28336 390 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 MSX2P35548 267 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 GNL1P36915 607 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 ATP4BP51164 291 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 NUP107P57740 925 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 TPI1P60174 286 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 RAB10P61026 200 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 ADIGQ0VDE8 80 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 GALNT2Q10471 571 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 PDAP1Q13442 181 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 CYTH1Q15438 398 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 DCAF6Q58WW2 860 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 TSTD2Q5T7W7 516 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 KRT80Q6KB66 452 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 FAM45BPQ6NSW5 357 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 POTEHQ6S545 545 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 ISLR2Q6UXK2 745 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 PIGZQ86VD9 579 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 SLC41A1Q8IVJ1 513 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 CCDC117Q8IWD4 279 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 NETO2Q8NC67 525 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 FAM45AQ8TCE6 357 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 SLC2A14Q8TDB8 520 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 LRTOMTQ8WZ04 291 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 KCTD13Q8WZ19 329 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 MARK4Q96L34 752 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 PGLYRP2Q96PD5 576 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 LPIN3Q9BQK8 851 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 TINF2Q9BSI4 451 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 CHRAC1Q9NRG0 131 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 GDAP2Q9NXN4 497 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 CACNA2D2Q9NY47 1150 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 UBQLN1Q9UMX0 589 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 HES2Q9Y543 173 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 KCNU1A8MYU2 1149 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 E7ENX8 843 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 M0QYT0 321 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 SRP72O76094 671 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 STMN1P16949 149 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 ATP5F1P24539 256 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 PNPLA4P41247 253 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 GLRBP48167 497 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 GJA9P57773 515 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 PCBP1Q15365 356 aaKnown RBP eCLIP12.28□□□□□ -0.441e-15■■■■■ 80.2
CPSF7-218ENST00000537641 FBXO47Q5MNV8 452 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 SAMD4BQ5PRF9 694 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 SLC27A1Q6PCB7 646 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 LIMS2Q7Z4I7 341 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 PLEKHH3Q7Z736 793 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 HERC6Q8IVU3 1022 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 KLHL23Q8NBE8 558 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 TNIP2Q8NFZ5 429 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 LPGAT1Q92604 370 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 CCDC126Q96EE4 140 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 TNIP3Q96KP6 325 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 ZMAT2Q96NC0 199 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 GPR78Q96P69 363 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 MRPL57Q9BQC6 102 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 TMEM79Q9BSE2 394 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 UPF3AQ9H1J1 476 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 ADAMTS10Q9H324 1103 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 ZNF408Q9H9D4 720 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 MEAF6Q9HAF1 191 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 CLK4Q9HAZ1 481 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 SNTG2Q9NY99 539 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 CD300AQ9UGN4 299 aa12.28□□□□□ -0.44
CPSF7-218ENST00000537641 PTBP2Q9UKA9 531 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 CNOT6Q9ULM6 557 aaKnown RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-218ENST00000537641 FAM95CA0A1B0GW59 222 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 DYTNA2CJ06 578 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 HTRA2O43464 458 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 HCRTO43612 131 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 PGK1P00558 417 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 CD4P01730 458 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 F7P08709 466 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 ADRA1BP35368 520 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 ATXN3P54252 364 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 FKBP1BP68106 108 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 PITX1P78337 314 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 COG7P83436 770 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 ZNF33AQ06730 810 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 ZBTB17Q13105 803 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 FASTKQ14296 549 aaKnown RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 NRF1Q16656 503 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 FAM110CQ1W6H9 321 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 MTX3Q5HYI7 312 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 PCID2Q5JVF3 399 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 PPP4R4Q6NUP7 873 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 C8orf82Q6P1X6 216 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 PAOXQ6QHF9 649 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 ZNF554Q86TJ5 538 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 TP53INP2Q8IXH6 220 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 FIBCD1Q8N539 461 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms