RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 BBOF1Q8ND07 529 aa15.84■□□□□ 0.13
SFSWAP-206ENST00000537582 OR2AP1Q8NGE2 309 aa15.84■□□□□ 0.13
SFSWAP-206ENST00000537582 OR52K1Q8NGK4 314 aa15.84■□□□□ 0.13
SFSWAP-206ENST00000537582 OR2A12Q8NGT7 310 aa15.84■□□□□ 0.13
SFSWAP-206ENST00000537582 RUBCNQ92622 972 aa15.84■□□□□ 0.13
SFSWAP-206ENST00000537582 WDR83Q9BRX9 315 aaKnown RBP15.84■□□□□ 0.13
SFSWAP-206ENST00000537582 C8orf33Q9H7E9 229 aaPredicted RBP15.84■□□□□ 0.13
SFSWAP-206ENST00000537582 PLA2G4CQ9UP65 541 aa15.84■□□□□ 0.13
SFSWAP-206ENST00000537582 TIMM44O43615 452 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 ANXA9O76027 345 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 ADRA1AP35348 466 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 TIE1P35590 1138 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 HSPA9P38646 679 aaKnown RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 KIR2DL1P43626 348 aaPredicted RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 CCNHP51946 323 aaPredicted RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 GEMP55040 296 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 PFKPQ01813 784 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 TRAF2Q12933 501 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 PCGF5Q86SE9 256 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 HOOK3Q86VS8 718 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 CCDC25Q86WR0 208 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 ZCCHC9Q8N567 271 aaKnown RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 PCDH20Q8N6Y1 951 aaKnown RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 PTPRN2Q92932 1015 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 ISG20Q96AZ6 181 aaKnown RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 SERPINB12Q96P63 405 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 NECAB3Q96P71 396 aaPredicted RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 ASB2Q96Q27 587 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 SMIM14Q96QK8 99 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 FMO2Q99518 471 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 CEP44Q9C0F1 390 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 TMEM245Q9H330 911 aa15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 EIF2B3Q9NR50 452 aaKnown RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 THAP10Q9P2Z0 257 aaPredicted RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 HECAQ9UBI9 543 aaPredicted RBP15.83■□□□□ 0.13
SFSWAP-206ENST00000537582 CXorf51AA0A1B0GTR3 108 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 SUN1O94901 812 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 IGSF6O95976 241 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 VCANP13611 3396 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 ST8SIA6P61647 398 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 NSUN2Q08J23 767 aaKnown RBP eCLIP15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 GALNT3Q14435 633 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 FASTKD3Q14CZ7 662 aaKnown RBP15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 PTPRRQ15256 657 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 C2orf27AQ580R0 203 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 CARD16Q5EG05 197 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 DENND5AQ6IQ26 1287 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 SERPINA13PQ6UXR4 307 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 CAMK1DQ8IU85 385 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 MPP5Q8N3R9 675 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 SLC25A41Q8N5S1 370 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 GRIN3AQ8TCU5 1115 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 AENQ8WTP8 325 aaKnown RBP15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 LRRC40Q9H9A6 602 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 NDRG2Q9UN36 371 aaKnown RBP15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 SORCS3Q9UPU3 1222 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 CHKBQ9Y259 395 aa15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 AAR2Q9Y312 384 aaKnown RBP15.83■□□□□ 0.12
SFSWAP-206ENST00000537582 TCF20Q9UGU0 1960 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 F5P12259 2224 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 GSRP00390 522 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 CTSLP07711 333 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 PDHA1P08559 390 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 SERPINF2P08697 491 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 TPH1P17752 444 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 NNMTP40261 264 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 TNFRSF4P43489 277 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 CRADDP78560 199 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 MPP3Q13368 585 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 MLF2Q15773 248 aaPredicted RBP15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 MYLK3Q32MK0 819 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 DENND2CQ68D51 928 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 FBXO38Q6PIJ6 1188 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 METTL3Q86U44 580 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 ZNF513Q8N8E2 541 aaPredicted RBP15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 MCUQ8NE86 351 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 ATXN2LQ8WWM7 1075 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 FAM3CQ92520 227 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 TRIB3Q96RU7 358 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 TBL1YQ9BQ87 522 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 TRIM56Q9BRZ2 755 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 FSD1LQ9BXM9 530 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 TDRD1Q9BXT4 1180 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 ZDHHC6Q9H6R6 413 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 POLR3BQ9NW08 1133 aaPredicted RBP15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 STARD13Q9Y3M8 1113 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 RAI2Q9Y5P3 530 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 STON1Q9Y6Q2 735 aa15.82■□□□□ 0.12
SFSWAP-206ENST00000537582 KRBA1A5PL33 1030 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 SIN3BO75182 1162 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 PRLP01236 227 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 PRKCGP05129 697 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 ATXN1LP0C7T5 689 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 VASPP50552 380 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 SESN2P58004 480 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 AP1S1P61966 158 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 SNRPD1P62314 119 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 CAV1Q03135 178 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 DHX9Q08211 1270 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 HIF1AQ16665 826 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms