RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 PFN3P60673 137 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 HNRNPKP61978 463 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 CXADRP78310 365 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 TAGLNQ01995 201 aaKnown RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 SLC20A2Q08357 652 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 CCDC173Q0VFZ6 552 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ISXQ2M1V0 245 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 POM121L1PQ3SYA9 428 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 PTPN20Q4JDL3 420 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 SEL1L3Q68CR1 1132 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 KIAA1161Q6NSJ0 714 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 TMEM214Q6NUQ4 689 aaKnown RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ZCCHC8Q6NZY4 707 aaKnown RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 GJB7Q6PEY0 223 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 KYAT3Q6YP21 454 aaKnown RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ZNF783Q6ZMS7 281 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 DPY19L3Q6ZPD9 716 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 Q6ZSR6 202 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 C11orf57Q6ZUT1 292 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 FAM183BPQ6ZVS7 135 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ARCQ7LC44 396 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ZSCAN30Q86W11 494 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ATCAYQ86WG3 371 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 IRF2BP1Q8IU81 584 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ZDHHC17Q8IUH5 632 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ALDH16A1Q8IZ83 802 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 CHST14Q8NCH0 376 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 C1orf131Q8NDD1 294 aaKnown RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 NELFBQ8WX92 580 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ISG20Q96AZ6 181 aaKnown RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 CENPTQ96BT3 561 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 FEM1CQ96JP0 617 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 TBATAQ96M53 351 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 CCDC114Q96M63 670 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 DEPDC7Q96QD5 511 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 INSM2Q96T92 566 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 BOCQ9BWV1 1114 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 SRRTQ9BXP5 876 aaKnown RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 CEP44Q9C0F1 390 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 TKTL2Q9H0I9 626 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 RETREG1Q9H6L5 497 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 WDCPQ9H6R7 721 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 SIX2Q9NPC8 291 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 APEX2Q9UBZ4 518 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 IL36AQ9UHA7 158 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 VPS51Q9UID3 782 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 HOOK1Q9UJC3 728 aaKnown RBP5.35□□□□□ -1.55
SNHG1-204ENST00000537068 TMEM59LQ9UK28 342 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 VPS28Q9UK41 221 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 PCDHGA8Q9Y5G5 932 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 ENTPD2Q9Y5L3 495 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 FADS3Q9Y5Q0 445 aa5.35□□□□□ -1.55
SNHG1-204ENST00000537068 KALRNO60229 2985 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 B8ZZF3 427 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 K7ENP7 123 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 FOXN3O00409 490 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 KPNA3O00505 521 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 NTN3O00634 580 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 TOR1BO14657 336 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 AREL1O15033 823 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 RAD51BO15315 384 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 SPINT1O43278 529 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 EFSO43281 561 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 CSO75390 466 aaKnown RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 LEFTY1O75610 366 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 TCEA3O75764 348 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 F9P00740 461 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 ALPPL2P10696 532 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 MYF5P13349 255 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 KRT5P13647 590 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 ADRB3P13945 408 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 PRLRP16471 622 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 ZNF16P17020 682 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 RRM1P23921 792 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 ITGB7P26010 798 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 SERPINH1P50454 418 aaKnown RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 NEK3P51956 506 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 TMPRSS3P57727 454 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 CLDN2P57739 230 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 SNX16P57768 344 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 RPS21P63220 83 aaKnown RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 GABREP78334 506 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 ARF5P84085 180 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 DAB2P98082 770 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 NRG1Q02297 640 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 APBA1Q02410 837 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 EIF2B5Q13144 721 aaKnown RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 PAK1Q13153 545 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 NME3Q13232 169 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 ARL13BQ3SXY8 428 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 SLC25A52Q3SY17 297 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 HS1BP3Q53T59 392 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 CARD16Q5EG05 197 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 TPRG1LQ5T0D9 272 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 MANEALQ5VSG8 457 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 OR6B2Q6IFH4 312 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 TRNP1Q6NT89 227 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 C22orf39Q6P5X5 142 aa5.34□□□□□ -1.55
SNHG1-204ENST00000537068 INO80CQ6PI98 192 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-204ENST00000537068 TMC6Q7Z403 805 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms