RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TUBA1AQ71U36 451 aa5.22□□□□□ -1.57
CCDC7-208ENST00000537047 MARK2Q7KZI7 788 aaKnown RBP5.22□□□□□ -1.57
CCDC7-208ENST00000537047 CCDC117Q8IWD4 279 aaPredicted RBP5.22□□□□□ -1.57
CCDC7-208ENST00000537047 KLHDC8BQ8IXV7 354 aa5.22□□□□□ -1.57
CCDC7-208ENST00000537047 CIARTQ8N365 385 aaPredicted RBP5.22□□□□□ -1.57
CCDC7-208ENST00000537047 TRIB2Q92519 343 aa5.22□□□□□ -1.57
CCDC7-208ENST00000537047 TUBA1CQ9BQE3 449 aa5.22□□□□□ -1.57
CCDC7-208ENST00000537047 DDX23Q9BUQ8 820 aaKnown RBP5.22□□□□□ -1.57
CCDC7-208ENST00000537047 hDV102S1A0JD36 115 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 ZG16O60844 167 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 TFRCP02786 760 aaKnown RBP5.21□□□□□ -1.58
CCDC7-208ENST00000537047 SERPINF1P36955 418 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 ZNF132P52740 706 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 SLC18A2Q05940 514 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 BYSLQ13895 437 aaKnown RBP5.21□□□□□ -1.58
CCDC7-208ENST00000537047 RUNDC3AQ59EK9 446 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 UNQ6126/PRO20091Q6UXV3 157 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 MON1AQ86VX9 555 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 MB21D2Q8IYB1 491 aaPredicted RBP5.21□□□□□ -1.58
CCDC7-208ENST00000537047 GALNT15Q8N3T1 639 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 SETD9Q8NE22 299 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 ARRDC2Q8TBH0 407 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 TAF15Q92804 592 aaKnown RBP eCLIP5.21□□□□□ -1.58
CCDC7-208ENST00000537047 WBP2Q969T9 261 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 UHRF2Q96PU4 802 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 MMP28Q9H239 520 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 OR6C3Q9NZP0 311 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 LRFN1Q9P244 771 aa5.21□□□□□ -1.58
CCDC7-208ENST00000537047 HNRNPCL2B2RXH8 293 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 SYT5O00445 386 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 IL1AP01583 271 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 IGHV4-30-4P0DP06 118 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 ARHGAP8P85298 464 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 ZBTB17Q13105 803 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 DMP1Q13316 513 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-208ENST00000537047 RPE65Q16518 533 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 SH2D4BQ5SQS7 431 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 PMS2CLQ68D20 193 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 CCDC129Q6ZRS4 1044 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 MCPH1Q8NEM0 835 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 YME1L1Q96TA2 773 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 CTDSP1Q9GZU7 261 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 UBTD1Q9HAC8 227 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 ARFGAP3Q9NP61 516 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 ATP8A2Q9NTI2 1148 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 GAB2Q9UQC2 676 aa5.2□□□□□ -1.58
CCDC7-208ENST00000537047 IGHV4OR15-8A0A075B7B6 117 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 H0Y3Z8 333 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 ACKR2O00590 384 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 KRT38O76015 456 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 CLDN14O95500 239 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 SERPINB2P05120 415 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 CTPS1P17812 591 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 CCDC105Q8IYK2 499 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 MAB21L3Q8N8X9 362 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 FSIP1Q8NA03 581 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 LRRC8CQ8TDW0 803 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 CSGALNACT1Q8TDX6 532 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 NOX4Q9NPH5 578 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 CHST12Q9NRB3 414 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 SLC9A2Q9UBY0 812 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 SNX9Q9Y5X1 595 aa5.19□□□□□ -1.58
CCDC7-208ENST00000537047 MORC2Q9Y6X9 1032 aaPredicted RBP5.19□□□□□ -1.58
CCDC7-208ENST00000537047 LDLRP01130 860 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 CRYAAP02489 173 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 GJC1P36383 396 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 PIGAP37287 484 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 CLCN3P51790 818 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 HLTFQ14527 1009 aaKnown RBP eCLIP5.18□□□□□ -1.58
CCDC7-208ENST00000537047 CALCRLQ16602 461 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 NCAPH2Q6IBW4 605 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 NAPEPLDQ6IQ20 393 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 GDPD4Q6W3E5 623 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 FOXL2NBQ6ZUU3 175 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 LINS1Q8NG48 757 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 ARNT2Q9HBZ2 717 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 NLRC4Q9NPP4 1024 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 ZNF711Q9Y462 761 aa5.18□□□□□ -1.58
CCDC7-208ENST00000537047 E7EVH7 732 aa5.17□□□□□ -1.58
CCDC7-208ENST00000537047 PNPLA4P41247 253 aa5.17□□□□□ -1.58
CCDC7-208ENST00000537047 PRKAA2P54646 552 aa5.17□□□□□ -1.58
CCDC7-208ENST00000537047 BTKQ06187 659 aa5.17□□□□□ -1.58
CCDC7-208ENST00000537047 THOC5Q13769 683 aaKnown RBP5.17□□□□□ -1.58
CCDC7-208ENST00000537047 C14orf177Q52M58 125 aa5.17□□□□□ -1.58
CCDC7-208ENST00000537047 OTUD7AQ8TE49 926 aaPredicted RBP5.17□□□□□ -1.58
CCDC7-208ENST00000537047 MTBPQ96DY7 904 aa5.17□□□□□ -1.58
CCDC7-208ENST00000537047 ZNF385AQ96PM9 386 aaKnown RBP5.17□□□□□ -1.58
CCDC7-208ENST00000537047 PTPRHQ9HD43 1115 aa5.17□□□□□ -1.58
CCDC7-208ENST00000537047 FBXO40Q9UH90 709 aa5.17□□□□□ -1.58
CCDC7-208ENST00000537047 KCNS2Q9ULS6 477 aa5.17□□□□□ -1.58
CCDC7-208ENST00000537047 CPED1A4D0V7 1026 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 KIF1CO43896 1103 aaKnown RBP5.16□□□□□ -1.58
CCDC7-208ENST00000537047 SKAP2O75563 359 aaPredicted RBP5.16□□□□□ -1.58
CCDC7-208ENST00000537047 METTL18O95568 372 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 KCNA5P22460 613 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 MYF6P23409 242 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 SERPINB3P29508 390 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 TTKP33981 857 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 PUM3Q15397 648 aaKnown RBP5.16□□□□□ -1.58
CCDC7-208ENST00000537047 ZNF484Q5JVG2 852 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms