RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 IDUAP35475 653 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 MMP13P45452 471 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 VPS41P49754 854 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 CCL23P55773 120 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 COG2Q14746 738 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 DGKKQ5KSL6 1271 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 ACSM6Q6P461 480 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 CCDC174Q6PII3 467 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 C16orf89Q6UX73 402 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 KYAT3Q6YP21 454 aaKnown RBP6□□□□□ -1.45
CLIP1-207ENST00000536634 TET1Q8NFU7 2136 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 OR52L2PQ8NGH6 319 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 PRSS3P2Q8NHM4 247 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 OVCA2Q8WZ82 227 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 AKAP1Q92667 903 aaKnown RBP eCLIP6□□□□□ -1.45
CLIP1-207ENST00000536634 FCRL5Q96RD9 977 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 SIGLEC11Q96RL6 698 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 GATA5Q9BWX5 397 aaPredicted RBP6□□□□□ -1.45
CLIP1-207ENST00000536634 MROH8Q9H579 483 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 CDCP1Q9H5V8 836 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 NLRC4Q9NPP4 1024 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 ARL8BQ9NVJ2 186 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 TRNAU1APQ9NX07 287 aaKnown RBP6□□□□□ -1.45
CLIP1-207ENST00000536634 COG5Q9UP83 839 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 HEMK1Q9Y5R4 338 aaPredicted RBP6□□□□□ -1.45
CLIP1-207ENST00000536634 ELP1O95163 1332 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 MROH7Q68CQ1 1323 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 A0A0U1RQG5 324 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-207ENST00000536634 PIP5K1BO14986 540 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 MOSPD3O75425 235 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 FLOT1O75955 427 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 SNAI1O95863 264 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-207ENST00000536634 FGBP02675 491 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 MMP8P22894 467 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 CST5P28325 142 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-207ENST00000536634 NDUFS1P28331 727 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 PLCD1P51178 756 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 ZNF91Q05481 1191 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 HNRNPA0Q13151 305 aaKnown RBP5.99□□□□□ -1.45
CLIP1-207ENST00000536634 RABEP1Q15276 862 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 TRIP6Q15654 476 aaKnown RBP5.99□□□□□ -1.45
CLIP1-207ENST00000536634 SPICE1Q8N0Z3 855 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 MIGA1Q8NAN2 632 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 MUL1Q969V5 352 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 COQ8BQ96D53 544 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 MCRS1Q96EZ8 462 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 GLT1D1Q96MS3 346 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 EIF3CQ99613 913 aaKnown RBP5.99□□□□□ -1.45
CLIP1-207ENST00000536634 MEIS3Q99687 375 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 RNF26Q9BY78 433 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-207ENST00000536634 HIPK3Q9H422 1215 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 PIH1D3Q9NQM4 214 aaKnown RBP5.99□□□□□ -1.45
CLIP1-207ENST00000536634 TMEM184CQ9NVA4 438 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 ASNSD1Q9NWL6 643 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 TUBA8Q9NY65 449 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-207ENST00000536634 MTMR4Q9NYA4 1195 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 HOXC10Q9NYD6 342 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 CA14Q9ULX7 337 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 MYH8P13535 1937 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 GRIN2DO15399 1336 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 TECTAO75443 2155 aa5.99□□□□□ -1.45
CLIP1-207ENST00000536634 GVINP1Q7Z2Y8 2422 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 CACNA1BQ00975 2339 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 MYO7AQ13402 2215 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 PNMA6EA0A0J9YXQ4 647 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 GXYLT2A0PJZ3 443 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 PPEF2O14830 753 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 NPC1O15118 1278 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 INPPL1O15357 1258 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 DUSP11O75319 330 aaKnown RBP5.98□□□□□ -1.45
CLIP1-207ENST00000536634 PLAUP00749 431 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ITGA5P08648 1049 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 IFIT2P09913 472 aaKnown RBP5.98□□□□□ -1.45
CLIP1-207ENST00000536634 MATN1P21941 496 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 PPM1AP35813 382 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 AGTR2P50052 363 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 BEX3Q00994 111 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 GABPAQ06546 454 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 GRM4Q14833 912 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 GORABQ5T7V8 394 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 LRCH2Q5VUJ6 765 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ARL6IP4Q66PJ3 421 aaKnown RBP5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ATF7IPQ6VMQ6 1270 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 SYTL1Q8IYJ3 562 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 NANOGP1Q8N7R0 232 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 SLC22A17Q8WUG5 538 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ARNTL2Q8WYA1 636 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 CUL5Q93034 780 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ZNF48Q96MX3 618 aaPredicted RBP5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ELOVL1Q9BW60 279 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 UPF3AQ9H1J1 476 aaKnown RBP5.98□□□□□ -1.45
CLIP1-207ENST00000536634 MTIF3Q9H2K0 278 aaKnown RBP5.98□□□□□ -1.45
CLIP1-207ENST00000536634 HELLSQ9NRZ9 838 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 FBXO28Q9NVF7 368 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ELOVL5Q9NYP7 299 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ZHX1Q9UKY1 873 aaPredicted RBP5.98□□□□□ -1.45
CLIP1-207ENST00000536634 CNPY2Q9Y2B0 182 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 SIRT4Q9Y6E7 314 aaPredicted RBP5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ZNF292O60281 2723 aa5.98□□□□□ -1.45
CLIP1-207ENST00000536634 ASTN1O14525 1302 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms