RNA–Protein interactions for RNA: ENST00000536452.1

CYB561A3-206, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 1,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-206ENST00000536452 PPP1R2P1Q96PQ5 205 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 TRMT61BQ9BVS5 477 aaKnown RBP13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 MANSC1Q9H8J5 431 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 BRD9Q9H8M2 597 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 LRRC40Q9H9A6 602 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 NMUR1Q9HB89 426 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 CASS4Q9NQ75 786 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 COMMD8Q9NX08 183 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 DONSONQ9NYP3 566 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 SLC17A7Q9P2U7 560 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 UXTQ9UBK9 157 aaPredicted RBP13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 NEU3Q9UQ49 428 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 TLR6Q9Y2C9 796 aa13.4□□□□□ -0.26
CYB561A3-206ENST00000536452 FAM92AA1XBS5 289 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 C2orf78A6NCI8 922 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 ARHGAP42A6NI28 874 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 SHISA7A6NL88 538 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 CACNG3O60359 315 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 RFPL1O75677 317 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 AOC1P19801 751 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 CD72P21854 359 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 CD68P34810 354 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 PSEN1P49768 467 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 MLLT6P55198 1093 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 NIPAL4Q0D2K0 466 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 FCHO2Q0JRZ9 810 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 CCDC15Q0P6D6 951 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 ZBTB17Q13105 803 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 MLF2Q15773 248 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 LINC00523Q86TU6 105 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 TRIM42Q8IWZ5 723 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 CCDC63Q8NA47 563 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 PRSS33Q8NF86 280 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 ACMSDQ8TDX5 336 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 MRPS31Q92665 395 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 ZFYVE19Q96K21 471 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 GORASP1Q9BQQ3 440 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 TTLL2Q9BWV7 592 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 FOXQ1Q9C009 403 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 SYBUQ9NX95 663 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 SLC12A4Q9UP95 1085 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 AAR2Q9Y312 384 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 PLLPQ9Y342 182 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 CACNA1IQ9P0X4 2223 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 WASH4PA8MWX3 477 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 DNAJC8O75937 253 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 JCHAINP01591 159 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 WEE1P30291 646 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 ALDH3A1P30838 453 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 PGFP49763 221 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 CLCN5P51795 746 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 PFKPQ01813 784 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 MGAT5Q09328 741 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 SF3A3Q12874 501 aaKnown RBP eCLIP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 SLC44A4Q53GD3 710 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 ACBD5Q5T8D3 534 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 FYB2Q5VWT5 728 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 NAPEPLDQ6IQ20 393 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 TIGD7Q6NT04 549 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 TMEM135Q86UB9 458 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 KLHDC8BQ8IXV7 354 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 DNAAF3Q8N9W5 541 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 OR52K1Q8NGK4 314 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 ZNF398Q8TD17 642 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 USP13Q92995 863 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 SLC39A13Q96H72 371 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 CEP295NLQ96MC4 621 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 SRPK1Q96SB4 655 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 TRPC7Q9HCX4 862 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 SLCO1B3Q9NPD5 702 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 OLA1Q9NTK5 396 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 CLIC5Q9NZA1 410 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 VANGL2Q9ULK5 521 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 USH1CQ9Y6N9 552 aa13.39□□□□□ -0.27
CYB561A3-206ENST00000536452 WDR87Q6ZQQ6 2873 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 DFFAO00273 331 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 KLF11O14901 512 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 MATN3O15232 486 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 MSI1O43347 362 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 UGT1A9O60656 530 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 USP1O94782 785 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 CCNB1P14635 433 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 DDX6P26196 483 aaKnown RBP eCLIP13.38□□□□□ -0.279e-7■■■■□ 22.2
CYB561A3-206ENST00000536452 YWHAQP27348 245 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 CRHR1P34998 444 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 AVPR1AP37288 418 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 TUBP50607 506 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 STARD6P59095 220 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 CRADDP78560 199 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 MTA1Q13330 715 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 GALNTL6Q49A17 601 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 TPRG1Q6ZUI0 275 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 ARHGAP12Q8IWW6 846 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 ATPAF2Q8N5M1 289 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 DNASE1L2Q92874 299 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 E2F7Q96AV8 911 aa13.38□□□□□ -0.27
CYB561A3-206ENST00000536452 CELF6Q96J87 481 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms