RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PRKCIP41743 596 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 ACADVLP49748 655 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 TPM4P67936 248 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 RAD51Q06609 339 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 SMAD1Q15797 465 aaKnown RBP14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 INO80DQ53TQ3 878 aaPredicted RBP14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 ZNF542PQ5EBM4 170 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 ABI3BPQ7Z7G0 1075 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 TTC7BQ86TV6 843 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 SLC22A18ASQ8N1D0 253 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 UMODL1-AS1Q8N2C9 162 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 MDM1Q8TC05 714 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 CASKIN2Q8WXE0 1202 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 RAB7BQ96AH8 199 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 VOPP1Q96AW1 172 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 BMFQ96LC9 184 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 KCTD15Q96SI1 283 aaPredicted RBP14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 NCAPGQ9BPX3 1015 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 SNRNP25Q9BV90 132 aaKnown RBP14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 CCDC86Q9H6F5 360 aaKnown RBP14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 KLHL11Q9NVR0 708 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 UCKL1Q9NWZ5 548 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 UBA2Q9UBT2 640 aaPredicted RBP14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 WDFY3Q8IZQ1 3526 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 ZFHX4Q86UP3 3567 aa14.49□□□□□ -0.09
RTN3P1-201ENST00000536295 COL5A1P20908 1838 aaPredicted RBP14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 J3KR12 359 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 TRIM38O00635 465 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 INSIG1O15503 277 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 SPINT1O43278 529 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 SIGLEC6O43699 453 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 PRPSAP2O60256 369 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 GZMAP12544 262 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 ITIH2P19823 946 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 DGKAP23743 735 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 MIPP30301 263 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 FANCCQ00597 558 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 CYTH1Q15438 398 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 TDRD12Q587J7 1177 aaKnown RBP14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 PPP6R3Q5H9R7 873 aaPredicted RBP14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 ERMARDQ5T6L9 678 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 KDM7AQ6ZMT4 941 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 PROSER1Q86XN7 944 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 SLC25A45Q8N413 288 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 LRRC19Q9H756 370 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 DNAJC28Q9NX36 388 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 LHX3Q9UBR4 397 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 PCDHGA1Q9Y5H4 931 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 HS3ST3A1Q9Y663 406 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 SCINQ9Y6U3 715 aa14.48□□□□□ -0.09
RTN3P1-201ENST00000536295 TRABD2BA6NFA1 517 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 FPGTO14772 594 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 MMP20O60882 483 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 PIGNO95427 931 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 CAPNS1P04632 268 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 CKMT2P17540 419 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 XPAP23025 273 aaPredicted RBP14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 HTR7P34969 479 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 PAPOLAP51003 745 aaKnown RBP14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 NDST2P52849 883 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 KLHL40Q2TBA0 621 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 HS1BP3Q53T59 392 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 KYAT3Q6YP21 454 aaKnown RBP14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 RFX8Q6ZV50 586 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 CPLX3Q8WVH0 158 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 TSC1Q92574 1164 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 ARHGEF26Q96DR7 871 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 TRIM11Q96F44 468 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 KLF6Q99612 283 aaPredicted RBP14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 WRAP53Q9BUR4 548 aaKnown RBP14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 C1QTNF2Q9BXJ5 285 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 EDEM3Q9BZQ6 932 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 SLC39A8Q9C0K1 460 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 PDFQ9HBH1 243 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 DONSONQ9NYP3 566 aa14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 IPO11Q9UI26 975 aaKnown RBP14.47□□□□□ -0.09
RTN3P1-201ENST00000536295 TRPM6Q9BX84 2022 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 ARHGAP42A6NI28 874 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 GOLGA6L19H0YKK7 550 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 DFFAO00273 331 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 PRAMEF11O60813 436 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 LRCH4O75427 683 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 PIAS2O75928 621 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 C1SP09871 688 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 JUPP14923 745 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 TIMP2P16035 220 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 ERCC2P18074 760 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 HNF1BP35680 557 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 RABIFP47224 123 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 UBASH3AP57075 661 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 DAB2P98082 770 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 PDE1CQ14123 709 aaPredicted RBP14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 FZD2Q14332 565 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 PROX2Q3B8N5 592 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 FIGNQ5HY92 759 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 CYP4V2Q6ZWL3 525 aaPredicted RBP14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 VPS36Q86VN1 386 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 ZSCAN30Q86W11 494 aa14.46□□□□□ -0.09
RTN3P1-201ENST00000536295 TMPRSS12Q86WS5 348 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms