RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PGGT1BP53609 377 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CASP7P55210 303 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 GPR85P60893 370 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 STX1BP61266 288 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 POLR2GP62487 172 aaKnown RBP eCLIP3.77□□□□□ -1.81
MCF2-210ENST00000536274 DYNLL1P63167 89 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 DYNLT1P63172 113 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 MRPS5P82675 430 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 EPS8Q12929 822 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 MRPL58Q14197 206 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 RFTN1Q14699 578 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 GPR68Q15743 365 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CYP1B1Q16678 543 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 FAM209BQ5JX69 171 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 STRIP1Q5VSL9 837 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CASC4Q6P4E1 433 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 HAUS6Q7Z4H7 955 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ZNF438Q7Z4V0 828 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 NECAB2Q7Z6G3 386 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SAMD14Q8IZD0 417 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 LSMEM2Q8N112 164 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CAMKK1Q8N5S9 505 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 FAM71DQ8N9W8 422 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 FBXO36Q8NEA4 188 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ETNPPLQ8TBG4 499 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 DCAKDQ8WVC6 231 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CLP1Q92989 425 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 RCN3Q96D15 328 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ZSCAN10Q96SZ4 725 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 TINF2Q9BSI4 451 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 EDEM3Q9BZQ6 932 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 COA1Q9GZY4 146 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 MKRN2Q9H000 416 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 WWP1Q9H0M0 922 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 VPS11Q9H270 941 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 C12orf10Q9HB07 376 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 KMT5AQ9NQR1 393 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 PNPLA3Q9NST1 481 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 C20orf96Q9NUD7 363 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 PARVAQ9NVD7 372 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 KCNK4Q9NYG8 393 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 UBA2Q9UBT2 640 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 AASSQ9UDR5 926 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 RIPK3Q9Y572 518 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 V9GYQ6 96 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 FRMPD3Q5JV73 1810 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 DOCK1Q14185 1865 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 NCANO14594 1321 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 BAZ2AQ9UIF9 1905 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 ZNF839A8K0R7 811 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 GPR25O00155 361 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 DNALI1O14645 258 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 DYRK3O43781 588 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 TLL1O43897 1013 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SORBS3O60504 671 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SNAP91O60641 907 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 GPC4O75487 556 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 OR7A10O76100 309 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PARNO95453 639 aaKnown RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 EIF2S1P05198 315 aaKnown RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 SERPINA6P08185 405 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 OR52Z1P0C646 297 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 FDX1P10109 184 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 XRCC5P13010 732 aaKnown RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 DDCP20711 480 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 NMT1P30419 496 aaKnown RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 ADSSP30520 456 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 BMP8BP34820 402 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CBX5P45973 191 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SERPINH1P50454 418 aaKnown RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 VBP1P61758 197 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 HSPA14Q0VDF9 509 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CETN1Q12798 172 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 GRSF1Q12849 480 aaKnown RBP eCLIP3.76□□□□□ -1.81
MCF2-210ENST00000536274 CDK10Q15131 360 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SLC9B1Q4ZJI4 515 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 TOR2AQ5JU69 321 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 ATG16L1Q676U5 607 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 IL31Q6EBC2 164 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PMF1Q6P1K2 205 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 BNIPLQ7Z465 357 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CRLF3Q8IUI8 442 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 ARMC8Q8IUR7 673 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PHC2Q8IXK0 858 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 FAM109AQ8N4B1 249 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CCNYL1Q8N7R7 359 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 GOT1L1Q8NHS2 421 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 ZNF564Q8TBZ8 553 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 MAPK15Q8TD08 544 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 POMGNT1Q8WZA1 660 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 LPGAT1Q92604 370 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 RIT1Q92963 219 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CD101Q93033 1021 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SDCCAG3Q96C92 435 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 DNAJC19Q96DA6 116 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SLC10A4Q96EP9 437 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CALML4Q96GE6 196 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 OR52B2Q96RD2 323 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 APBA2Q99767 749 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms