RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-205	ENST00000536107	MIER3	Q7Z3K6	550 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	VASH2	Q86V25	355 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	CACUL1	Q86Y37	369 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	NOSTRIN	Q8IVI9	506 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	ARHGEF19	Q8IW93	802 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	EXOC8	Q8IYI6	725 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	TEX19	Q8NA77	164 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	CTCFL	Q8NI51	663 aa	Predicted RBP	4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	SAP25	Q8TEE9	199 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	ST8SIA2	Q92186	375 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	WASF1	Q92558	559 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	ATXN7L3B	Q96GX2	97 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	CEP170P1	Q96L14	293 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	CYP2S1	Q96SQ9	504 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	CXCL16	Q9H2A7	254 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	TMEM245	Q9H330	911 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	RPF1	Q9H9Y2	349 aa	Known RBP	4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	HELLS	Q9NRZ9	838 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	ACTR10	Q9NZ32	417 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	DEC1	Q9P2X7	70 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	PCDHB6	Q9Y5E3	794 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	SLCO1B1	Q9Y6L6	691 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107	EVPL	Q92817	2033 aa		4.19	□□□□□ -1.74
YBX3-205	ENST00000536107		A0A1B0GUA9	196 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	OR6C75	A6NL08	312 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	SCAMP3	O14828	347 aa	Known RBP	4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	IFIT3	O14879	490 aa	Known RBP	4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	YKT6	O15498	198 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	PAPSS1	O43252	624 aa	Predicted RBP	4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	RBMXL2	O75526	392 aa	Known RBP	4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	CYP17A1	P05093	508 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	MME	P08473	750 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	CXCR5	P32302	372 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	EIF2D	P41214	584 aa	Known RBP	4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	TPMT	P51580	245 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	NAPA	P54920	295 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	NPEPPS	P55786	919 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	PTEN	P60484	403 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	MBTD1	Q05BQ5	628 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	GPR17	Q13304	367 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	DMP1	Q13316	513 aa	Predicted RBP	4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	KCNB1	Q14721	858 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	DHCR24	Q15392	516 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	NAB2	Q15742	525 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	MCMDC2	Q4G0Z9	681 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	EGFLAM	Q63HQ2	1017 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	KANSL1	Q7Z3B3	1105 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	OSTM1	Q86WC4	334 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	SPATA3	Q8NHX4	192 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	MAPK15	Q8TD08	544 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	CALML6	Q8TD86	181 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	SCFD1	Q8WVM8	642 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	PRCC	Q92733	491 aa	Predicted RBP	4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	SIPA1	Q96FS4	1042 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	LURAP1	Q96LR2	239 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	ACOX2	Q99424	681 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	LZTS2	Q9BRK4	669 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	ADPGK	Q9BRR6	497 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	FUCA2	Q9BTY2	467 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	TEKT3	Q9BXF9	490 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	SLC29A3	Q9BZD2	475 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	ITM2C	Q9NQX7	267 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	GDF3	Q9NR23	364 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	TUBD1	Q9UJT1	453 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	RCAN3	Q9UKA8	241 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	PCDHGA8	Q9Y5G5	932 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	SVIL	O95425	2214 aa		4.18	□□□□□ -1.74
YBX3-205	ENST00000536107	HELZ	P42694	1942 aa	Known RBP	4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	TNRC6B	Q9UPQ9	1833 aa	Known RBP	4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	MTMR11	A4FU01	709 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	KCNJ18	B7U540	433 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	SLC9A3R1	O14745	358 aa	Predicted RBP	4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	SMAD7	O15105	426 aa	Known RBP	4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	TSPAN3	O60637	253 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	VNN2	O95498	520 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	RARG	P13631	454 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	HDC	P19113	662 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	CD27	P26842	260 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	EPHA8	P29322	1005 aa	Predicted RBP	4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	SLC5A2	P31639	672 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	HSPA4	P34932	840 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	GNAQ	P50148	359 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	BCAT1	P54687	386 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	FOXI1	Q12951	378 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	TRDN	Q13061	729 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	PAK1	Q13153	545 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	MXD4	Q14582	209 aa	Predicted RBP	4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	SEC23A	Q15436	765 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	IMMT	Q16891	758 aa	Known RBP	4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	ISX	Q2M1V0	245 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	SMTNL2	Q2TAL5	461 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	ANO4	Q32M45	955 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	LACTB2	Q53H82	288 aa	Predicted RBP	4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	PPP4R3A	Q6IN85	833 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	SPNS3	Q6ZMD2	512 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	ANO5	Q75V66	913 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	DPH6	Q7L8W6	267 aa		4.17	□□□□□ -1.74
YBX3-205	ENST00000536107	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.17	□□□□□ -1.74

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