RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ALDH1A3P47895 512 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 SLC12A2P55011 1212 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 RFTN1Q14699 578 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 ZNF423Q2M1K9 1284 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 MMEL1Q495T6 779 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 THEMIS2Q5TEJ8 643 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 NXNQ6DKJ4 435 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 KIAA0930Q6ICG6 404 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 GALNT15Q8N3T1 639 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 CCNYL1Q8N7R7 359 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 SCAMP5Q8TAC9 235 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 MAELQ96JY0 434 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 FBXO5Q9UKT4 447 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 GPR182O15218 404 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 KPNA6O60684 536 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 ZNF623O75123 536 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 PAX3P23760 479 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 SLC1A2P43004 574 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 TAS2R39P59534 338 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 DLG1Q12959 904 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 ART3Q13508 389 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 ZNF460Q14592 562 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 TSTD2Q5T7W7 516 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 BTBD8Q5XKL5 378 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 ST13P4Q8IZP2 240 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 CEP70Q8NHQ1 597 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 OMDQ99983 421 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 TRPV6Q9H1D0 765 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 PIDD1Q9HB75 910 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 TMLHEQ9NVH6 421 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 SLC2A6Q9UGQ3 507 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 G3BP2Q9UN86 482 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 M0QZQ0 153 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 PMPCBO75439 489 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 CHRNA1P02708 482 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 ATP5F1P24539 256 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 FLOT2Q14254 428 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 GRM2Q14416 872 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 AFMIDQ63HM1 303 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 TMEM198Q66K66 360 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 ZNF470Q6ECI4 717 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 NEPROQ6NW34 567 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 LRRTM3Q86VH5 581 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 GABPB2Q8TAK5 448 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 ZFAND2BQ8WV99 257 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 HEXDCQ8WVB3 486 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 RCN3Q96D15 328 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 CCDC126Q96EE4 140 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 ELMO2Q96JJ3 720 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 MRGPRX2Q96LB1 330 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 CATSPER2Q96P56 530 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 SENP6Q9GZR1 1112 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 SMOC2Q9H3U7 446 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 ARNT2Q9HBZ2 717 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 CLIC5Q9NZA1 410 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 INPP5FQ9Y2H2 1132 aa16.2■□□□□ 0.18
CHMP1A-202ENST00000535997 JUNP05412 331 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 HLA-DQB2P05538 268 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 ME2P23368 584 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 THOP1P52888 689 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 SATB1Q01826 763 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 FAM83EQ2M2I3 478 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 ARTNQ5T4W7 220 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 TRIM67Q6ZTA4 783 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 THEM5Q8N1Q8 247 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 SPATA6LQ8N4H0 392 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 CALML6Q8TD86 181 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 WDR41Q9HAD4 459 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 TBC1D13Q9NVG8 400 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 FNIP2Q9P278 1114 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 HSPA1AP0DMV8 641 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 HSPA1BP0DMV9 641 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 FOLH1Q04609 750 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 PDCD2Q16342 344 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 GRAMD1BQ3KR37 738 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 SH2D4BQ5SQS7 431 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 RTL3Q8N8U3 475 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 FAR2Q96K12 515 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 CENPKQ9BS16 269 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 NDFIP2Q9NV92 336 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 SFMBT1Q9UHJ3 866 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 TBC1D30Q9Y2I9 924 aa16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 COPG1Q9Y678 874 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-202ENST00000535997 BPTFQ12830 3046 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 KIF3CO14782 793 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 DENRO43583 198 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 AP1G1O43747 822 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 CPB1P15086 417 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 CALRP27797 417 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 BRCC3P46736 316 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 MLLT6P55198 1093 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 ROR2Q01974 943 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 NRG1Q02297 640 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 LIN52Q52LA3 116 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 CD300LGQ6UXG3 332 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 TXNDC5Q8NBS9 432 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 OR10T2Q8NGX3 314 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 DLG3Q92796 817 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 C1orf74Q96LT6 269 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms