RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 A0A1W2PQU0 124 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 FAM170AA1A519 330 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 RNF103O00237 685 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 FGF10O15520 208 aaPredicted RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 BNIP3LO60238 219 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 RAMP2O60895 175 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 KRT37O76014 449 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 POP4O95707 220 aaKnown RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 ATXN1LP0C7T5 689 aaKnown RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 DESP17661 470 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 TNFAIP3P21580 790 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 HNRNPA2B1P22626 353 aaKnown RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 ZNF165P49910 485 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 CCNHP51946 323 aaPredicted RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 NEK3P51956 506 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 SNRPD1P62314 119 aaKnown RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 MAMLD1Q13495 774 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 POLD3Q15054 466 aaPredicted RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 EFHC2Q5JST6 749 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 KIAA1161Q6NSJ0 714 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 RWDD4Q6NW29 188 aaKnown RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 ABI3BPQ7Z7G0 1075 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 DCP2Q8IU60 420 aaKnown RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 UMODL1-AS1Q8N2C9 162 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 GALNT15Q8N3T1 639 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 IFT43Q96FT9 208 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 KLHDC7BQ96G42 594 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 OSBPL1AQ9BXW6 950 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 MAGEB5Q9BZ81 275 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 TNKS2Q9H2K2 1166 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 CATSPERBQ9H7T0 1116 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 GPR27Q9NS67 375 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 PARVAQ9NVD7 372 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 KLHL11Q9NVR0 708 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 DKK4Q9UBT3 224 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 DNAI1Q9UI46 699 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 ZMIZ1Q9ULJ6 1067 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 ZFR2Q9UPR6 939 aaKnown RBP10.98□□□□□ -0.65
CCDC60-202ENST00000535685 MFHAS1Q9Y4C4 1052 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 HS3ST3A1Q9Y663 406 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 RP1P56715 2156 aa10.98□□□□□ -0.65
CCDC60-202ENST00000535685 ASPMQ8IZT6 3477 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 LRRC53A6NM62 1247 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 ITGAVP06756 1048 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 ADRB3P13945 408 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 EPHB2P29323 1055 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 MAT2AP31153 395 aaKnown RBP10.97□□□□□ -0.65
CCDC60-202ENST00000535685 AKT2P31751 481 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 ZNF135P52742 658 aaPredicted RBP10.97□□□□□ -0.65
CCDC60-202ENST00000535685 RPS21P63220 83 aaKnown RBP10.97□□□□□ -0.65
CCDC60-202ENST00000535685 OGDHQ02218 1023 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 ILKQ13418 452 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 NR1I3Q14994 352 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 SMAD1Q15797 465 aaKnown RBP10.97□□□□□ -0.65
CCDC60-202ENST00000535685 POM121L1PQ3SYA9 428 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 PARP15Q460N3 678 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 ZNF805Q5CZA5 627 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 DCUN1D2Q6PH85 259 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 PSTKQ8IV42 348 aaKnown RBP10.97□□□□□ -0.65
CCDC60-202ENST00000535685 CACTIN-AS1Q8N1I8 211 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 PNPLA1Q8N8W4 532 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 OR2AP1Q8NGE2 309 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 HCAR2Q8TDS4 363 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 FEM1CQ96JP0 617 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 MCEEQ96PE7 176 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 LENG8Q96PV6 779 aaPredicted RBP10.97□□□□□ -0.65
CCDC60-202ENST00000535685 NCAPGQ9BPX3 1015 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 SEPT11Q9NVA2 429 aaKnown RBP10.97□□□□□ -0.65
CCDC60-202ENST00000535685 TAS2R14Q9NYV8 317 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 HECAQ9UBI9 543 aaPredicted RBP10.97□□□□□ -0.65
CCDC60-202ENST00000535685 DKK3Q9UBP4 350 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 FTSJ1Q9UET6 329 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 FCF1Q9Y324 198 aaKnown RBP10.97□□□□□ -0.65
CCDC60-202ENST00000535685 FADS3Q9Y5Q0 445 aa10.97□□□□□ -0.65
CCDC60-202ENST00000535685 CACNA1GO43497 2377 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 TMEM191CA6NGB0 347 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 ENC1O14682 589 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 AREL1O15033 823 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 TSPAN6O43657 245 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 LDOC1O95751 146 aaPredicted RBP10.96□□□□□ -0.65
CCDC60-202ENST00000535685 SUOXP51687 545 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 NDST2P52849 883 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 SERINC3Q13530 473 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 ASIC2Q16515 512 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 KLHL40Q2TBA0 621 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 MYLK3Q32MK0 819 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 PRAMEF14Q5SWL7 426 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 CAVIN1Q6NZI2 390 aaKnown RBP10.96□□□□□ -0.65
CCDC60-202ENST00000535685 SCYL2Q6P3W7 929 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 FBXL19Q6PCT2 694 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 PARS2Q7L3T8 475 aaKnown RBP10.96□□□□□ -0.65
CCDC60-202ENST00000535685 ZNF571Q7Z3V5 609 aaPredicted RBP10.96□□□□□ -0.65
CCDC60-202ENST00000535685 TMC6Q7Z403 805 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 TMPRSS12Q86WS5 348 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 GATAD2AQ86YP4 633 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 PYROXD2Q8N2H3 581 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 DENND6BQ8NEG7 585 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 GRIN3AQ8TCU5 1115 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 SYN2Q92777 582 aaPredicted RBP10.96□□□□□ -0.65
CCDC60-202ENST00000535685 ARHGEF26Q96DR7 871 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms