RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 RASA4BC9J798 803 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 FPGTO14772 594 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 FFAR2O15552 330 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 RASA4O43374 803 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 PIAS2O75928 621 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 ALPPL2P10696 532 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 ACP1P24666 158 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 PSMA2P25787 234 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 HTR7P34969 479 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 ABL2P42684 1182 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 RABIFP47224 123 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 TPI1P60174 286 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 RHOAP61586 193 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 ASIC2Q16515 512 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 INO80DQ53TQ3 878 aaPredicted RBP16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 HES3Q5TGS1 186 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 TTC7BQ86TV6 843 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 OR4C6Q8NH72 309 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 BAP1Q92560 729 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 HMCESQ96FZ2 354 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 BMFQ96LC9 184 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 LENG8Q96PV6 779 aaPredicted RBP16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 C1QTNF2Q9BXJ5 285 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 TTYH3Q9C0H2 523 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 RTN4Q9NQC3 1192 aaKnown RBP16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 UCKL1Q9NWZ5 548 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 TAS2R14Q9NYV8 317 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 IPO11Q9UI26 975 aaKnown RBP16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 GPSM3Q9Y4H4 160 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 URB1O60287 2271 aaKnown RBP16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 POM121BA6NF01 834 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 LRRC53A6NM62 1247 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 RAD51BO15315 384 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 CLDN6P56747 220 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 HNRNPKP61978 463 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 E2F1Q01094 437 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 TARDBPQ13148 414 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 MAMLD1Q13495 774 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 SERINC3Q13530 473 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 UMODL1-AS1Q8N2C9 162 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 DENND6BQ8NEG7 585 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 ASB12Q8WXK4 309 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 NXPE2Q96DL1 559 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 SYT11Q9BT88 431 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 KLC2Q9H0B6 622 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 ITM2BQ9Y287 266 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 CACNA1GO43497 2377 aa16.41■□□□□ 0.22
CLSTN3-204ENST00000535313 H3BM21 787 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 XPAP23025 273 aaPredicted RBP16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 OGDHQ02218 1023 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 PDE1CQ14123 709 aaPredicted RBP16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 FZD2Q14332 565 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 ZNF542PQ5EBM4 170 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 C19orf48Q6RUI8 117 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 PARGQ86W56 976 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 CXorf40AQ8TE69 158 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 KLF6Q99612 283 aaPredicted RBP16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 NCAPGQ9BPX3 1015 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 DUSP23Q9BVJ7 150 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 C1QTNF7Q9BXJ2 289 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 GPR27Q9NS67 375 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 EVA1BQ9NVM1 165 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 NLGN3Q9NZ94 848 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 DKK3Q9UBP4 350 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 UBA2Q9UBT2 640 aaPredicted RBP16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 GGT7Q9UJ14 662 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 AP4E1Q9UPM8 1137 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 MFHAS1Q9Y4C4 1052 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 ITPR1Q14643 2758 aa16.4■□□□□ 0.22
CLSTN3-204ENST00000535313 TDRD6O60522 2096 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 SPTY2D1-AS1A0A0U1RR47 76 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 A0A1W2PQC6 194 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 EIF3CLB5ME19 914 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 EEF2KO00418 725 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 AREL1O15033 823 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 SCAMP1O15126 338 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 RNF8O76064 485 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 CSF2P04141 144 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 ZNF165P49910 485 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 LRRC73Q5JTD7 316 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 PLEKHA7Q6IQ23 1121 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 CAVIN1Q6NZI2 390 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 NETO2Q8NC67 525 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 RFFLQ8WZ73 363 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 EIF3CQ99613 913 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 CPEB1Q9BZB8 566 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 DHX35Q9H5Z1 703 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 HAUS4Q9H6D7 363 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 AIPL1Q9NZN9 384 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 CLCA2Q9UQC9 943 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 AK5Q9Y6K8 562 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 CELSR3Q9NYQ7 3312 aa16.39■□□□□ 0.21
CLSTN3-204ENST00000535313 ARHGAP42A6NI28 874 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 SPINT1O43278 529 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 DAPK3O43293 454 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 ATMINO43313 823 aaPredicted RBP16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 MMP20O60882 483 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 TM7SF2O76062 418 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 FTLP02792 175 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms