RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SEPT3Q9UH03 358 aa14.21□□□□□ -0.13
VPS11-205ENST00000534551 GMEB2Q9UKD1 530 aa14.21□□□□□ -0.13
VPS11-205ENST00000534551 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.21□□□□□ -0.13
VPS11-205ENST00000534551 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
VPS11-205ENST00000534551 TTLL3Q9Y4R7 772 aa14.21□□□□□ -0.13
VPS11-205ENST00000534551 RIF1Q5UIP0 2472 aaKnown RBP14.21□□□□□ -0.13
VPS11-205ENST00000534551 MYLKQ15746 1914 aa14.21□□□□□ -0.14
VPS11-205ENST00000534551 CCDC66A2RUB6 948 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 RHOBTB1O94844 696 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 FSBPO95073 299 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 PRKCGP05129 697 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 IGHV4-34P06331 123 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 ITGB7P26010 798 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 OXTRP30559 389 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 RWDD2BP57060 319 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 SEMG2Q02383 582 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 DSC2Q02487 901 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 PPIDQ08752 370 aaKnown RBP14.2□□□□□ -0.14
VPS11-205ENST00000534551 IHHQ14623 411 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 FAM46CQ5VWP2 391 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 ZNF662Q6ZS27 426 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 C11orf74Q86VG3 221 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 CAMK1DQ8IU85 385 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 CCDC13Q8IYE1 715 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 RNF10Q8N5U6 811 aaKnown RBP14.2□□□□□ -0.14
VPS11-205ENST00000534551 CCNYQ8ND76 341 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 TMIEQ8NEW7 156 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 MAML1Q92585 1016 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 PIGKQ92643 395 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 HES6Q96HZ4 224 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 CALR3Q96L12 384 aaKnown RBP14.2□□□□□ -0.14
VPS11-205ENST00000534551 ZNF599Q96NL3 588 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 PSKH2Q96QS6 385 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 MGME1Q9BQP7 344 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 OSBPL8Q9BZF1 889 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 TRMT1Q9NXH9 659 aaKnown RBP14.2□□□□□ -0.14
VPS11-205ENST00000534551 SEPT10Q9P0V9 454 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 FZD4Q9ULV1 537 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 SCML1Q9UN30 329 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 NCKAP1Q9Y2A7 1128 aa14.2□□□□□ -0.14
VPS11-205ENST00000534551 GVINP1Q7Z2Y8 2422 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 TCRBV7S2A1N4TA0A589 114 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 PLRG1O43660 514 aaKnown RBP14.19□□□□□ -0.14
VPS11-205ENST00000534551 CR2P20023 1033 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 TGM2P21980 687 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 MAT2AP31153 395 aaKnown RBP14.19□□□□□ -0.14
VPS11-205ENST00000534551 SCNN1BP51168 640 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 AP1B1Q10567 949 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 TFDP2Q14188 446 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 RFTN1Q14699 578 aaPredicted RBP14.19□□□□□ -0.14
VPS11-205ENST00000534551 SF3A2Q15428 464 aaKnown RBP14.19□□□□□ -0.14
VPS11-205ENST00000534551 KIAA0895LQ68EN5 471 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 GDPD4Q6W3E5 623 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 BBS12Q6ZW61 710 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 ERN2Q76MJ5 926 aaKnown RBP14.19□□□□□ -0.14
VPS11-205ENST00000534551 SRLQ86TD4 932 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 ZC3H18Q86VM9 953 aaKnown RBP14.19□□□□□ -0.14
VPS11-205ENST00000534551 REXO1L1PQ8IX06 675 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 ZCCHC9Q8N567 271 aaKnown RBP14.19□□□□□ -0.14
VPS11-205ENST00000534551 TEX26Q8N6G2 289 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 KLK6Q92876 244 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 BIRC7Q96CA5 298 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 ORAI3Q9BRQ5 295 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 EBF2Q9HAK2 575 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 SGK2Q9HBY8 427 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 DYRK4Q9NR20 520 aa14.19□□□□□ -0.14
VPS11-205ENST00000534551 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.19□□□□□ -0.14
VPS11-205ENST00000534551 SCN8AQ9UQD0 1980 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 DNAH14Q0VDD8 3507 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 CACNA1EQ15878 2313 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 BCLAF3A2AJT9 711 aaKnown RBP14.18□□□□□ -0.14
VPS11-205ENST00000534551 F5H423 210 aaPredicted RBP14.18□□□□□ -0.14
VPS11-205ENST00000534551 POP4O95707 220 aaKnown RBP14.18□□□□□ -0.14
VPS11-205ENST00000534551 RETP07949 1114 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 ADRB3P13945 408 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 ZFXP17010 805 aaPredicted RBP14.18□□□□□ -0.14
VPS11-205ENST00000534551 MX2P20592 715 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 TGM1P22735 817 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 NEK3P51956 506 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 CCDC173Q0VFZ6 552 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 TRAF2Q12933 501 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 PRKD1Q15139 912 aaPredicted RBP14.18□□□□□ -0.14
VPS11-205ENST00000534551 ZNF805Q5CZA5 627 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 MARC1Q5VT66 337 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 SEL1L3Q68CR1 1132 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 TIGD7Q6NT04 549 aaPredicted RBP14.18□□□□□ -0.14
VPS11-205ENST00000534551 PLPP6Q8IY26 295 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 RGL4Q8IZJ4 473 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 UBL4BQ8N7F7 174 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 RUBCNQ92622 972 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 PPP1R16AQ96I34 528 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 TSGA13Q96PP4 275 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 ALS2CR12Q96Q35 445 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 MYOCQ99972 504 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 MIR1-1HGQ9H1L0 117 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 NOD2Q9HC29 1040 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 RXFP3Q9NSD7 469 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 EIF2B4Q9UI10 523 aaKnown RBP14.18□□□□□ -0.14
VPS11-205ENST00000534551 PILRBQ9UKJ0 227 aa14.18□□□□□ -0.14
VPS11-205ENST00000534551 ZNF292O60281 2723 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms