RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	NUP205	Q92621	2012 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CLUH	O75153	1309 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PCLO	Q9Y6V0	5065 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RRN3P2	A6NIE6	340 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442		E9PAM4	449 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	EYA2	O00167	538 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ACTL6B	O94805	426 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RHOBTB1	O94844	696 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ITGB3	P05106	788 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ANXA6	P08133	673 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ZFP36	P26651	326 aa	Known RBP	4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CD6	P30203	668 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	HOXA6	P31267	233 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	UQCRC1	P31930	480 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ADD2	P35612	726 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	GATM	P50440	423 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	BCAT1	P54687	386 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	UCN	P55089	124 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	POLE2	P56282	527 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TOB2	Q14106	344 aa	Predicted RBP	4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SMTNL2	Q2TAL5	461 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FBXO47	Q5MNV8	452 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	JAKMIP3	Q5VZ66	844 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	MZT2A	Q6P582	158 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PDXDC1	Q6P996	788 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	KLHL17	Q6TDP4	642 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PARM1	Q6UWI2	310 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	MICALCL	Q6ZW33	695 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SIAH1	Q8IUQ4	282 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RASGRP3	Q8IV61	690 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FBXO16	Q8IX29	292 aa	Predicted RBP	4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SLC15A3	Q8IY34	581 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FTSJ3	Q8IY81	847 aa	Known RBP	4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	LINC01465	Q8N7H1	131 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TEX19	Q8NA77	164 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CPT1C	Q8TCG5	803 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	MRPS27	Q92552	414 aa	Known RBP	4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	APBB2	Q92870	758 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	BOD1	Q96IK1	185 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	OSBPL9	Q96SU4	736 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	LGMN	Q99538	433 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PI4K2A	Q9BTU6	479 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	AMBRA1	Q9C0C7	1298 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FSCN3	Q9NQT6	498 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	HELLS	Q9NRZ9	838 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SERTAD3	Q9UJW9	196 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SNX14	Q9Y5W7	946 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ZMYM6	O95789	1325 aa		4.94	□□□□□ -1.62
ECHDC1-223	ENST00000534442	LAMA4	Q16363	1823 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TISP43	B9A030	160 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PRRT4	C9JH25	899 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442		J3KTA2	159 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CCNT2	O60583	730 aa	Known RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	AKAP3	O75969	853 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	NCR1	O76036	304 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	VIP	P01282	170 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ERBB2	P04626	1255 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	HLA-DOA	P06340	250 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CD59	P13987	128 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ITGB6	P18564	788 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	COPB2	P35606	906 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	BTD	P43251	543 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PGD	P52209	483 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PRKAA2	P54646	552 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ALDH18A1	P54886	795 aa	Known RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	GPS1	Q13098	491 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TUBB3	Q13509	450 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CCNI	Q14094	377 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SMC1A	Q14683	1233 aa	Known RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	GRM4	Q14833	912 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	DUSP28	Q4G0W2	176 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CAVIN4	Q5BKX8	364 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RABL3	Q5HYI8	236 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CERCAM	Q5T4B2	595 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ICE2	Q659A1	982 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SP5	Q6BEB4	398 aa	Predicted RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	C15orf39	Q6ZRI6	1047 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	GET4	Q7L5D6	327 aa	Predicted RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	MRPL43	Q8N983	215 aa	Known RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SIMC1	Q8NDZ2	872 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	OR6J1	Q8NGC5	347 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SNX19	Q92543	992 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RSC1A1	Q92681	617 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FGF11	Q92914	225 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RNF31	Q96EP0	1072 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	NAF1	Q96HR8	494 aa	Known RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ZNF668	Q96K58	619 aa	Predicted RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	HIST1H2AA	Q96QV6	131 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PANK3	Q9H999	370 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	WDR6	Q9NNW5	1121 aa	Known RBP	4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	AKIP1	Q9NQ31	210 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TMEM74B	Q9NUR3	256 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	KIF17	Q9P2E2	1029 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FEM1B	Q9UK73	627 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	MYH2	Q9UKX2	1941 aa		4.93	□□□□□ -1.62
ECHDC1-223	ENST00000534442	UBE4B	O95155	1302 aa		4.93	□□□□□ -1.62

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