RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 MFHAS1Q9Y4C4 1052 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 CHD5Q8TDI0 1954 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 CACNA1EQ15878 2313 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 A0A1W2PQU0 124 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 DCDC2BA2VCK2 349 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 CER1O95813 267 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 SERPINA4P29622 427 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 GRIA4P48058 902 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 LBRQ14739 615 aaKnown RBP13.56□□□□□ -0.24
CAPN1-227ENST00000533909 TCEAL1Q15170 157 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 LRRC38Q5VT99 294 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 ARHGAP36Q6ZRI8 547 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 PARS2Q7L3T8 475 aaKnown RBP13.56□□□□□ -0.24
CAPN1-227ENST00000533909 TTC7BQ86TV6 843 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 TRIM69Q86WT6 500 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 LRRC49Q8IUZ0 686 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 RAB7BQ96AH8 199 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 FAM131CQ96AQ9 280 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 FEM1CQ96JP0 617 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 CALR3Q96L12 384 aaKnown RBP13.56□□□□□ -0.24
CAPN1-227ENST00000533909 SLC6A18Q96N87 628 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 DMTF1Q9Y222 760 aa13.56□□□□□ -0.24
CAPN1-227ENST00000533909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
CAPN1-227ENST00000533909 CACNA1AO00555 2505 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 KNL1Q8NG31 2342 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 A0A0A6YYK5 440 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-227ENST00000533909 SLC31A1O15431 190 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 MFSD11O43934 449 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 MX2P20592 715 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 COMTP21964 271 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 KDELR1P24390 212 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 IL4RP24394 825 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 CD38P28907 300 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 HSPA9P38646 679 aaKnown RBP13.55□□□□□ -0.24
CAPN1-227ENST00000533909 SCNN1BP51168 640 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 ARSEP51690 589 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 GSDMDP57764 484 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 TAS2R38P59533 333 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 RPS21P63220 83 aaKnown RBP13.55□□□□□ -0.24
CAPN1-227ENST00000533909 SGCGQ13326 291 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 STAT4Q14765 748 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 MARC1Q5VT66 337 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 NAPEPLDQ6IQ20 393 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 KIAA1161Q6NSJ0 714 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 DAAM2Q86T65 1068 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 SRLQ86TD4 932 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 HORMAD1Q86X24 394 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 TSEN2Q8NCE0 465 aaKnown RBP13.55□□□□□ -0.24
CAPN1-227ENST00000533909 PCDH19Q8TAB3 1148 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 RAPGEF5Q92565 580 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 KLK6Q92876 244 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 TUBGCP5Q96RT8 1024 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 CPEB1Q9BZB8 566 aaKnown RBP13.55□□□□□ -0.24
CAPN1-227ENST00000533909 ANKRD6Q9Y2G4 727 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 HYOU1Q9Y4L1 999 aa13.55□□□□□ -0.24
CAPN1-227ENST00000533909 PRAMEF26H0Y7S4 382 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 CDX4O14627 284 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-227ENST00000533909 APOL1O14791 398 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 INSIG1O15503 277 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 LATO43561 262 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 PSTPIP1O43586 416 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 TSPAN6O43657 245 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 BUB1BO60566 1050 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-227ENST00000533909 MAGEC1O60732 1142 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 PIGNO95427 931 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 PRLRP16471 622 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 ZFXP17010 805 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-227ENST00000533909 FECHP22830 423 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 AKT2P31751 481 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 MMP13P45452 471 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 SUOXP51687 545 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 HADHBP55084 474 aaKnown RBP13.54□□□□□ -0.24
CAPN1-227ENST00000533909 AP1S1P61966 158 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 BCL2L1Q07817 233 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 ITKQ08881 620 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 SLC10A7Q0GE19 358 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 PAFAH1B3Q15102 231 aaKnown RBP13.54□□□□□ -0.24
CAPN1-227ENST00000533909 KIF19Q2TAC6 998 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 NCBP2-AS2Q69YL0 99 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-227ENST00000533909 C11orf63Q6NUN7 778 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 ERAP2Q6P179 960 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 LAYNQ6UX15 382 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 RAD9BQ6WBX8 426 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 ZSCAN30Q86W11 494 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 RFX6Q8HWS3 928 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 CCDC50Q8IVM0 306 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 TP53INP2Q8IXH6 220 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 CCNYQ8ND76 341 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 OR2I1PQ8NGU4 316 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 C1orf216Q8TAB5 229 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 CXorf40AQ8TE69 158 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 RNF25Q96BH1 459 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-227ENST00000533909 ZNF641Q96N77 438 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-227ENST00000533909 RNF157Q96PX1 679 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 PSKH2Q96QS6 385 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 SLC32A1Q9H598 525 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 SUV39H2Q9H5I1 410 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms