RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 CASP10Q92851 521 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 ZNF669Q96BR6 464 aaPredicted RBP9.81□□□□□ -0.84
CHKA-207ENST00000533728 FCRL2Q96LA5 508 aaPredicted RBP9.81□□□□□ -0.84
CHKA-207ENST00000533728 FCRL3Q96P31 734 aaPredicted RBP9.81□□□□□ -0.84
CHKA-207ENST00000533728 RANBP9Q96S59 729 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 TMEM209Q96SK2 561 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 CDK5RAP1Q96SZ6 601 aaKnown RBP9.81□□□□□ -0.84
CHKA-207ENST00000533728 MRPL9Q9BYD2 267 aaKnown RBP9.81□□□□□ -0.84
CHKA-207ENST00000533728 RHOBTB2Q9BYZ6 727 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 WWP1Q9H0M0 922 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 ARNT2Q9HBZ2 717 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 VPS45Q9NRW7 570 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 PCMTD2Q9NV79 361 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 OSER1Q9NX31 292 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 AKAP13Q12802 2813 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 PLXNA4Q9HCM2 1894 aa9.81□□□□□ -0.84
CHKA-207ENST00000533728 LINC01553A4QN01 128 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 C1QTNF9BB2RNN3 333 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 E9PAM4 449 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 TPP1O14773 563 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 TBC1D4O60343 1298 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 EFCAB14O75071 495 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 BAIAP3O94812 1187 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 HAUS5O94927 633 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 SNUPNO95149 360 aaKnown RBP9.8□□□□□ -0.84
CHKA-207ENST00000533728 IGLV3-27P01718 113 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 PROCP04070 461 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 SERPINE1P05121 402 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 C1QTNF9P0C862 333 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 T-ENOLP0DO92 83 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 CALB2P22676 271 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 CCND1P24385 295 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 ADRA1AP35348 466 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 PDE1BQ01064 536 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 HNRNPDQ14103 355 aaKnown RBP9.8□□□□□ -0.84
CHKA-207ENST00000533728 BTG3Q14201 252 aaPredicted RBP9.8□□□□□ -0.84
CHKA-207ENST00000533728 CHI3L2Q15782 390 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 SLC14A2Q15849 920 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 PAN2Q504Q3 1202 aaKnown RBP9.8□□□□□ -0.84
CHKA-207ENST00000533728 SLC39A12Q504Y0 691 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 WASHC2DQ5SRD0 308 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 VARS2Q5ST30 1063 aaKnown RBP9.8□□□□□ -0.84
CHKA-207ENST00000533728 N4BP2L1Q5TBK1 243 aaPredicted RBP9.8□□□□□ -0.84
CHKA-207ENST00000533728 ICE2Q659A1 982 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 MBLAC2Q68D91 279 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 PKN3Q6P5Z2 889 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 CNKSR3Q6P9H4 555 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 UNQ6494/PRO21346Q6UXR6 183 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 CLEC14AQ86T13 490 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 TP53INP2Q8IXH6 220 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 CCDC33Q8N5R6 958 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 CNTD1Q8N815 330 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 DNAAF3Q8N9W5 541 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 KDF1Q8NAX2 398 aaPredicted RBP9.8□□□□□ -0.84
CHKA-207ENST00000533728 OR6Y1Q8NGX8 325 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 RFWD2Q8NHY2 731 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 SCAMP5Q8TAC9 235 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 NSL1Q96IY1 281 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 AGAP3Q96P47 875 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 TBL1YQ9BQ87 522 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 TMEM120AQ9BXJ8 343 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 MMADHCQ9H3L0 296 aaPredicted RBP9.8□□□□□ -0.84
CHKA-207ENST00000533728 MFSD1Q9H3U5 465 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 RHOJQ9H4E5 214 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 NOD2Q9HC29 1040 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 TMEM248Q9NWD8 314 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.8□□□□□ -0.84
CHKA-207ENST00000533728 EMCNQ9ULC0 261 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 OBSL1O75147 1896 aa9.8□□□□□ -0.84
CHKA-207ENST00000533728 C2CD3Q4AC94 2353 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 ABHD14A-ACY1A0A1B0GW23 586 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 A0A1W2PQH9 124 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 DRGXA6NNA5 263 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 TMEM114B3SHH9 223 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 TADA2AO75478 443 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 PAPSS2O95340 614 aaPredicted RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 GSRP00390 522 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 FGF3P11487 239 aaPredicted RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 ALOX15P16050 662 aaPredicted RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 PAMP19021 973 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 YWHAQP27348 245 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 TYK2P29597 1187 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 HARS2P49590 506 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 TUBP50607 506 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 RENBPP51606 427 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 TBX4P57082 545 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 YBEYP58557 167 aaPredicted RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 RPL10AP62906 217 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 KCNJ2P63252 427 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 GPR17Q13304 367 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 LAMB3Q13751 1172 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 C5orf22Q49AR2 442 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 FASTKD1Q53R41 847 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 TAF1BQ53T94 588 aaPredicted RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 KIAA0930Q6ICG6 404 aaPredicted RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 RWDD4Q6NW29 188 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 ZC3H14Q6PJT7 736 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 KIAA0408Q6ZU52 694 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 MTDHQ86UE4 582 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 KCNMB4Q86W47 210 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms