RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TTC31Q49AM3 519 aaPredicted RBP17.67■□□□□ 0.42
NXF1-216ENST00000533499 ANKRD20A2Q5SQ80 823 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 ANKRD20A1Q5TYW2 823 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 ANKRD20A3Q5VUR7 823 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 ITPRIPL1Q6GPH6 555 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 GDPD4Q6W3E5 623 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 PRUNE1Q86TP1 453 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 CAMK1DQ8IU85 385 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 KLHL7Q8IXQ5 586 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 CAMKK1Q8N5S9 505 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 NKD2Q969F2 451 aaPredicted RBP17.67■□□□□ 0.42
NXF1-216ENST00000533499 TEKT5Q96M29 485 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 KLHL32Q96NJ5 620 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 NUDCD1Q96RS6 583 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 VAT1Q99536 393 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 OMDQ99983 421 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 ATP13A3Q9H7F0 1226 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 GLOD4Q9HC38 313 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 RNF14Q9UBS8 474 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 ATP8A1Q9Y2Q0 1164 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 WASF2Q9Y6W5 498 aa17.67■□□□□ 0.42
NXF1-216ENST00000533499 A0A1W2PP55 124 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 K7ESF4 209 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 AXIN1O15169 862 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 PHF2O75151 1096 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 RNASEH2AO75792 299 aaKnown RBP17.66■□□□□ 0.42
NXF1-216ENST00000533499 ZNF189O75820 626 aaPredicted RBP17.66■□□□□ 0.42
NXF1-216ENST00000533499 ADH1BP00325 375 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 XPAP23025 273 aaPredicted RBP17.66■□□□□ 0.42
NXF1-216ENST00000533499 SERPINA4P29622 427 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 MAPK8P45983 427 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 CSNK1DP48730 415 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 METAP1P53582 386 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 NIPAL4Q0D2K0 466 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 ANGPT1Q15389 498 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 OASLQ15646 514 aaKnown RBP17.66■□□□□ 0.42
NXF1-216ENST00000533499 PCSK7Q16549 785 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 NCEH1Q6PIU2 408 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 CCDC137Q6PK04 289 aaKnown RBP17.66■□□□□ 0.42
NXF1-216ENST00000533499 KDELC2Q7Z4H8 507 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 PLPP6Q8IY26 295 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 HDDC3Q8N4P3 179 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 TMIEQ8NEW7 156 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 PPP1R16AQ96I34 528 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 SPATA13Q96N96 652 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 RBM15Q96T37 977 aaKnown RBP eCLIP17.66■□□□□ 0.424e-6■□□□□ 8.6
NXF1-216ENST00000533499 DDX47Q9H0S4 455 aaKnown RBP17.66■□□□□ 0.42
NXF1-216ENST00000533499 PABPC3Q9H361 631 aaKnown RBP17.66■□□□□ 0.42
NXF1-216ENST00000533499 USP29Q9HBJ7 922 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 CD248Q9HCU0 757 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 PRMT8Q9NR22 394 aaPredicted RBP17.66■□□□□ 0.42
NXF1-216ENST00000533499 FBXL12Q9NXK8 326 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 UBP1Q9NZI7 540 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 AMACRQ9UHK6 382 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 CDC23Q9UJX2 597 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 TRHDEQ9UKU6 1024 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 PPM1HQ9ULR3 514 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 CYP8B1Q9UNU6 501 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 PCDHGC4Q9Y5F7 938 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 KMT2EQ8IZD2 1858 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 ANKRD36A6QL64 1941 aa17.66■□□□□ 0.42
NXF1-216ENST00000533499 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.65■□□□□ 0.42
NXF1-216ENST00000533499 PMPCBO75439 489 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 ITGAVP06756 1048 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 SERPINF2P08697 491 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 ETS1P14921 441 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 C5AR1P21730 350 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 STIP1P31948 543 aaKnown RBP17.65■□□□□ 0.42
NXF1-216ENST00000533499 COILP38432 576 aaPredicted RBP17.65■□□□□ 0.42
NXF1-216ENST00000533499 TERF1P54274 439 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 CKAP4Q07065 602 aaKnown RBP17.65■□□□□ 0.42
NXF1-216ENST00000533499 GRM3Q14832 879 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 TRIP13Q15645 432 aaPredicted RBP17.65■□□□□ 0.42
NXF1-216ENST00000533499 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.65■□□□□ 0.42
NXF1-216ENST00000533499 MAMSTRQ6ZN01 415 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 RLN3Q8WXF3 142 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 ARRDC3Q96B67 414 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 OSBPL1AQ9BXW6 950 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 SLC25A51Q9H1U9 297 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 SUV39H2Q9H5I1 410 aa17.65■□□□□ 0.42
NXF1-216ENST00000533499 DRG1Q9Y295 367 aaKnown RBP17.65■□□□□ 0.42
NXF1-216ENST00000533499 GALR2O43603 387 aaPredicted RBP17.64■□□□□ 0.41
NXF1-216ENST00000533499 OPHN1O60890 802 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 PAPSS2O95340 614 aaPredicted RBP17.64■□□□□ 0.41
NXF1-216ENST00000533499 CR2P20023 1033 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 CES1P23141 567 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 PSMB4P28070 264 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 CD68P34810 354 aaPredicted RBP17.64■□□□□ 0.41
NXF1-216ENST00000533499 VPS41P49754 854 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 LMNB2Q03252 620 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 C2orf54Q08AI8 447 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 CNTN1Q12860 1018 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 SFSWAPQ12872 951 aaKnown RBP17.64■□□□□ 0.41
NXF1-216ENST00000533499 PRPSAP1Q14558 356 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 ZNF805Q5CZA5 627 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 LRRC73Q5JTD7 316 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 FAXCQ5TGI0 409 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 TTC27Q6P3X3 843 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 FBXL19Q6PCT2 694 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms