RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 TBCELQ5QJ74 424 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 ZBTB46Q86UZ6 589 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 SLC7A5P1Q8MH63 180 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 TRPC4APQ8TEL6 797 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 YME1L1Q96TA2 773 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 ZNF184Q99676 751 aaPredicted RBP12.36□□□□□ -0.43
BDNF-218ENST00000533246 TBCDQ9BTW9 1192 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 TMPRSS4Q9NRS4 437 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 ABCC13Q9NSE7 274 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 ZNF358Q9NW07 568 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 TAS2R13Q9NYV9 303 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 ZNF510Q9Y2H8 683 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 PCDHA11Q9Y5I1 949 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 AK5Q9Y6K8 562 aa12.36□□□□□ -0.43
BDNF-218ENST00000533246 C2CD4BA6NLJ0 364 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 STK25O00506 426 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 MMP3P08254 477 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 FOSL1P15407 271 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 NELFEP18615 380 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 IST1P53990 364 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 ADAM17P78536 824 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 SEMA5AQ13591 1074 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 TMEM63BQ5T3F8 832 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 RRM2BQ7LG56 351 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 OR6Y1Q8NGX8 325 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 SEPT8Q92599 483 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 FOPNLQ96NB1 174 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 PHF12Q96QT6 1004 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 PRPF18Q99633 342 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 CYLDQ9NQC7 956 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 NMRK1Q9NWW6 199 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 RRN3Q9NYV6 651 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 MAGEB3O15480 346 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 ST13P50502 369 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 MRPS6P82932 125 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 CCDC85BQ15834 202 aaPredicted RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 NDUFA5Q16718 116 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 PGS1Q32NB8 556 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 SPDYE7PQ495Y7 208 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 LACTB2Q53H82 288 aaPredicted RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 PCID2Q5JVF3 399 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 WDR45BQ5MNZ6 344 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 VSTM1Q6UX27 236 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 VPS37AQ8NEZ2 397 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 TNIP2Q8NFZ5 429 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 SERAC1Q96JX3 654 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 KCTD15Q96SI1 283 aaPredicted RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.35□□□□□ -0.43
BDNF-218ENST00000533246 UXTQ9UBK9 157 aaPredicted RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 BTRCQ9Y297 605 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 ATRNL1Q5VV63 1379 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 YJEFN3A6XGL0 299 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 SLCO1B7G3V0H7 640 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 CNOT3O75175 753 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 CPSF4O95639 269 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 ZNF682O95780 498 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 ITGALP20701 1170 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 SOAT1P35610 550 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 TUBA4AP68366 448 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 PLD1Q13393 1074 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 RBM44Q6ZP01 1051 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 CROCCP3Q8IVE0 287 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 TMEM86AQ8N2M4 240 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 LZTR1Q8N653 840 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 RIN3Q8TB24 985 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 MTFMTQ96DP5 389 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 PPP1R10Q96QC0 940 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 VAT1Q99536 393 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 TMEM79Q9BSE2 394 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 EXOSC4Q9NPD3 245 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 ARHGEF4Q9NR80 690 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 FAM32AQ9Y421 112 aaKnown RBP12.35□□□□□ -0.43
BDNF-218ENST00000533246 MYH8P13535 1937 aa12.35□□□□□ -0.43
BDNF-218ENST00000533246 MFN2O95140 757 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 URODP06132 367 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 ICAM3P32942 547 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 CHRNB3Q05901 458 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 TTLL9Q3SXZ7 439 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 PDCD4Q53EL6 469 aaKnown RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 ELMSAN1Q6PJG2 1045 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 SLC2A7Q6PXP3 512 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 MYO1HQ8N1T3 1032 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 LMO3Q8TAP4 145 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 RCN3Q96D15 328 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 TUBGCP5Q96RT8 1024 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 ADGRE3Q9BY15 652 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 ABCG8Q9H221 673 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 FZD8Q9H461 694 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 WDR41Q9HAD4 459 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 TMEM59LQ9UK28 342 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 PLLPQ9Y342 182 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 DUOX1Q9NRD9 1551 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 PSMD12O00232 456 aaPredicted RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 PAGE1O75459 146 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 LRIG2O94898 1065 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 PRLP01236 227 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 ASPAP45381 313 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 CRYBB1P53674 252 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms