RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 AP1G1O43747 822 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 UGT2B4P06133 528 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 AFF3P51826 1226 aaKnown RBP20.72■□□□□ 0.91
CCS-208ENST00000533244 VAV2P52735 878 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 NSUN2Q08J23 767 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCS-208ENST00000533244 PUM1Q14671 1186 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCS-208ENST00000533244 GDPD4Q6W3E5 623 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 ATPAF2Q8N5M1 289 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 CALR3Q96L12 384 aaKnown RBP20.72■□□□□ 0.91
CCS-208ENST00000533244 RTKNQ9BST9 563 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 LACRTQ9GZZ8 138 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 GOLPH3Q9H4A6 298 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 TMEM9BQ9NQ34 198 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 DDX56Q9NY93 547 aaKnown RBP20.72■□□□□ 0.91
CCS-208ENST00000533244 C16orf96A6NNT2 1141 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 TM4SF5O14894 197 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 MUSKO15146 869 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 PSTPIP1O43586 416 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 SPOPO43791 374 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 NUDT1P36639 197 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 ABL2P42684 1182 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 GRIA4P48058 902 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 RACK1P63244 317 aaKnown RBP20.71■□□□□ 0.91
CCS-208ENST00000533244 BNC1Q01954 994 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 SLC10A7Q0GE19 358 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 LBRQ14739 615 aaKnown RBP20.71■□□□□ 0.91
CCS-208ENST00000533244 GRM3Q14832 879 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 TPCN2Q8NHX9 752 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 RAB7BQ96AH8 199 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 KLHL32Q96NJ5 620 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 CINPQ9BW66 212 aaPredicted RBP20.71■□□□□ 0.91
CCS-208ENST00000533244 ZDHHC5Q9C0B5 715 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 DKK3Q9UBP4 350 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 SEPT3Q9UH03 358 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 FADS3Q9Y5Q0 445 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 DUSP10Q9Y6W6 482 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 CACNA1AO00555 2505 aa20.71■□□□□ 0.91
CCS-208ENST00000533244 TSPAN11A1L157 253 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 GOLGA6L6A8MZA4 724 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 SPINT1O43278 529 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 RNGTTO60942 597 aaKnown RBP20.7■□□□□ 0.9
CCS-208ENST00000533244 KRT1P04264 644 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 SYPP08247 313 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 GARSP41250 739 aaKnown RBP20.7■□□□□ 0.9
CCS-208ENST00000533244 GSDMDP57764 484 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 GRIK2Q13002 908 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 TAZQ16635 292 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 ZFYVE27Q5T4F4 411 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 SLC9A4Q6AI14 798 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 FBXL19Q6PCT2 694 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 PLD5Q8N7P1 536 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 HCAR2Q8TDS4 363 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 FATE1Q969F0 183 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 SLC6A18Q96N87 628 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 TUBGCP5Q96RT8 1024 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 DMTF1Q9Y222 760 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 C4orf47A7E2U8 309 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 CR2P20023 1033 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 HSPA9P38646 679 aaKnown RBP20.7■□□□□ 0.9
CCS-208ENST00000533244 RENBPP51606 427 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 GBE1Q04446 702 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 TMEM259Q4ZIN3 620 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 SRLQ86TD4 932 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 PRPF39Q86UA1 669 aaKnown RBP20.7■□□□□ 0.9
CCS-208ENST00000533244 HORMAD1Q86X24 394 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 TEX26Q8N6G2 289 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 TSGA13Q96PP4 275 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 DTLQ9NZJ0 730 aa20.7■□□□□ 0.9
CCS-208ENST00000533244 ZFR2Q9UPR6 939 aaKnown RBP20.7■□□□□ 0.9
CCS-208ENST00000533244 DOCK9Q9BZ29 2069 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 A0A1W2PQU0 124 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 A0A1W2PR77 199 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 WNT9AO14904 365 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 AREL1O15033 823 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 GJB3O75712 270 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 PIGNO95427 931 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 CSNK1EP49674 416 aaKnown RBP20.69■□□□□ 0.9
CCS-208ENST00000533244 SLC10A2Q12908 348 aaPredicted RBP20.69■□□□□ 0.9
CCS-208ENST00000533244 ZNF284Q2VY69 593 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 NAPEPLDQ6IQ20 393 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 PGBD5Q8N414 524 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 MAML1Q92585 1016 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 NSMCE3Q96MG7 304 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 ZNF641Q96N77 438 aaPredicted RBP20.69■□□□□ 0.9
CCS-208ENST00000533244 MGME1Q9BQP7 344 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 SUV39H2Q9H5I1 410 aa20.69■□□□□ 0.9
CCS-208ENST00000533244 DNAAF2Q9NVR5 837 aaKnown RBP20.69■□□□□ 0.9
CCS-208ENST00000533244 SHROOM3Q8TF72 1996 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 A0A1B0GVT2 93 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 VILLO15195 856 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 MAT2AP31153 395 aaKnown RBP20.68■□□□□ 0.9
CCS-208ENST00000533244 CDKN2BP42772 138 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 MAPK8P45983 427 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 AP1S1P61966 158 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 ZNF235Q14590 738 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 TEAD4Q15561 434 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 IFI16Q16666 785 aaKnown RBP20.68■□□□□ 0.9
CCS-208ENST00000533244 SETMARQ53H47 684 aaPredicted RBP20.68■□□□□ 0.9
CCS-208ENST00000533244 KIAA1161Q6NSJ0 714 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 MFSD7Q6UXD7 560 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms