RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 NEMP1O14524 444 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 H2AFYO75367 372 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 NEBLO76041 1014 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 PDE5AO76074 875 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 ANPEPP15144 967 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 ITGAXP20702 1163 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 NUMBP49757 651 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 RPL14P50914 215 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 TBX4P57082 545 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 EFEMP1Q12805 493 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 KLF10Q13118 480 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 RBM20Q5T481 1227 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 TMC7Q7Z402 723 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 PTCD2Q8WV60 388 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 SREK1Q8WXA9 508 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 ELMO2Q96JJ3 720 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 LENG8Q96PV6 779 aaPredicted RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 SLC25A51Q9H1U9 297 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 RNF186Q9NXI6 227 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 FBXO5Q9UKT4 447 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 PPM1HQ9ULR3 514 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 TDRD15B5MCY1 1934 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 EOMESO95936 686 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 MMP2P08253 660 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 COL6A2P12110 1019 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 COX4I1P13073 169 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 EPHB1P54762 984 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 BTKQ06187 659 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 HNRNPDQ14103 355 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 TSNAXIP1Q2TAA8 658 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 LSM12Q3MHD2 195 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 VARS2Q5ST30 1063 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 KIAA0930Q6ICG6 404 aaPredicted RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 NEPROQ6NW34 567 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 MSANTD2Q6P1R3 559 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 DCP1BQ8IZD4 617 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 DEFB107AQ8IZN7 70 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 IGSF8Q969P0 613 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 PSMG2Q969U7 264 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 FAM136AQ96C01 138 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 PABPC5Q96DU9 382 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 IMP4Q96G21 291 aaKnown RBP15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 C8orf48Q96LL4 319 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 TSNARE1Q96NA8 513 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 NDNQ99608 321 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 NUF2Q9BZD4 464 aa15.5■□□□□ 0.07
CACNA1E-208ENST00000533229 HDAC3O15379 428 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 GJB3O75712 270 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 PDHA1P08559 390 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 SERPINB5P36952 375 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 CD86P42081 329 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 PSEN1P49768 467 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 ACLYP53396 1101 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 C6orf163Q5TEZ5 329 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 METTL21CQ5VZV1 264 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 MIB1Q86YT6 1006 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 LRRC49Q8IUZ0 686 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 PCSK9Q8NBP7 692 aaKnown RBP15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 ACTRT2Q8TDY3 377 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 HEXDCQ8WVB3 486 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 SGF29Q96ES7 293 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 FUBP3Q96I24 572 aaKnown RBP eCLIP15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 TTC1Q99614 292 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 UBE2OQ9C0C9 1292 aaKnown RBP15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 ZYG11BQ9C0D3 744 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 ARNT2Q9HBZ2 717 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 ATP13A1Q9HD20 1204 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 CDH22Q9UJ99 828 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 MID2Q9UJV3 735 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 SQORQ9Y6N5 450 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 NYNRINQ9P2P1 1898 aaKnown RBP15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 NEMP2A6NFY4 417 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 TMEM189-UBE2V1I3L0A0 370 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 CCL22O00626 93 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 CCNT2O60583 730 aaKnown RBP15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 LUC7L3O95232 432 aaKnown RBP15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 RHOQP17081 205 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 CD151P48509 253 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 FAM189BP81408 668 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 DSC2Q02487 901 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 ITKQ08881 620 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 CUL3Q13618 768 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 FSCBQ5H9T9 825 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 PPM1LQ5SGD2 360 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 SEL1L3Q68CR1 1132 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 FBXL22Q6P050 247 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 LCA5Q86VQ0 697 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 CIR1Q86X95 450 aaPredicted RBP15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 HPS6Q86YV9 775 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 OR13J1Q8NGT2 312 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 MYEOVQ96EZ4 313 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 OLFM1Q99784 485 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 CRISPLD1Q9H336 500 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 FBXO44Q9H4M3 255 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 TMEM248Q9NWD8 314 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 G3BP2Q9UN86 482 aaKnown RBP15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 SSX2IPQ9Y2D8 614 aa15.49■□□□□ 0.07
CACNA1E-208ENST00000533229 PATJQ8NI35 1801 aa15.48■□□□□ 0.07
CACNA1E-208ENST00000533229 TMEM233B4DJY2 109 aa15.48■□□□□ 0.07
CACNA1E-208ENST00000533229 TADA2AO75478 443 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms