RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ITGA2BP08514 1039 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 TGM2P21980 687 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 CD70P32970 193 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 HADHBP55084 474 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 SNX16P57768 344 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 SETMARQ53H47 684 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 OR6B2Q6IFH4 312 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 DNAJC24Q6P3W2 148 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 TRIM69Q86WT6 500 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 XYLT1Q86Y38 959 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 FAM26EQ8N5C1 309 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 KIF18AQ8NI77 898 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 ZNF564Q8TBZ8 553 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 CALR3Q96L12 384 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 ALS2CR12Q96Q35 445 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 UBXN6Q9BZV1 441 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 MIS12Q9H081 205 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 MRPL47Q9HD33 250 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 OLA1Q9NTK5 396 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 PARVAQ9NVD7 372 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 HBS1LQ9Y450 684 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 TEX15Q9BXT5 2789 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 SIGLEC16A6NMB1 481 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 TMEM110-MUSTN1A8MSY1 372 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 E5RJQ4 531 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 SCAMP1O15126 338 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 FANCGO15287 622 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 PIAS2O75928 621 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 IL1BP01584 269 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 SRPRAP08240 638 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 GIMD1P0DJR0 217 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 LCP1P13796 627 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 MAT2AP31153 395 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 ACADSBP45954 432 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 RPL34P49207 117 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 YWHAGP61981 247 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 MESDQ14696 234 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 SLFN11Q7Z7L1 901 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 PIGZQ86VD9 579 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 MFN1Q8IWA4 741 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 LRRC57Q8N9N7 239 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 ZSCAN1Q8NBB4 408 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 C3orf20Q8ND61 904 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 KCTD13Q8WZ19 329 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 IFT43Q96FT9 208 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 BTBD6Q96KE9 485 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 FAM129BQ96TA1 746 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 LRRC4CQ9HCJ2 640 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 GEMIN8Q9NWZ8 242 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 PCDHGA7Q9Y5G6 932 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 SCINQ9Y6U3 715 aa11.56□□□□□ -0.56
TRAPPC4-213ENST00000533149 MYO9AB2RTY4 2548 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 CCDC187A0A096LP49 1063 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 LY6G6EA0A0G2JKS1 128 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 CTAGE9A4FU28 777 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 TMEM191CA6NGB0 347 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 K7ESM1 405 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 MYO1FO00160 1098 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 IRAK2O43187 625 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 PLRG1O43660 514 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 FTCDO95954 541 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 KRT3P12035 628 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 CSKP41240 450 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 CCR10P46092 362 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 GSCP56915 257 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 FOXK1P85037 733 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 ZNF177Q13360 481 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 ELAVL3Q14576 367 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 ZCCHC8Q6NZY4 707 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 DCUN1D2Q6PH85 259 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 FAM183BPQ6ZVS7 135 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 C14orf80Q86SX3 495 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 DAAM2Q86T65 1068 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 SYCE1Q8N0S2 351 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 WDR48Q8TAF3 677 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 FIBINQ8TAL6 211 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 WFDC5Q8TCV5 224 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 FAM131CQ96AQ9 280 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 MRGPRX3Q96LB0 322 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 NAPGQ99747 312 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 SELENOOQ9BVL4 669 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 TRIM7Q9C029 511 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 GOLPH3Q9H4A6 298 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 LRRC4Q9HBW1 653 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 SEPT10Q9P0V9 454 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 ANAPC7Q9UJX3 599 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 ERVW-1Q9UQF0 538 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 JRKLQ9Y4A0 524 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 U3KQA8 63 aa11.55□□□□□ -0.56
TRAPPC4-213ENST00000533149 CPED1A4D0V7 1026 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 TTC34A8MYJ7 566 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 TBL1XO60907 577 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 ATP1A1P05023 1023 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 MZF1P28698 734 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 RPL7AP62424 266 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 SLC6A3Q01959 620 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 TBR1Q16650 682 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms