RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SPACA7Q96KW9 195 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 TEKT5Q96M29 485 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZNF641Q96N77 438 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 KLHL32Q96NJ5 620 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 SEMA3CQ99985 751 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 CEP41Q9BYV8 373 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 SUV39H2Q9H5I1 410 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 ATP13A3Q9H7F0 1226 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 C10orf88Q9H8K7 445 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 KLHL8Q9P2G9 620 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 TRHDEQ9UKU6 1024 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 DNPEPQ9ULA0 475 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 ATP8A1Q9Y2Q0 1164 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 WASF2Q9Y6W5 498 aa11.38□□□□□ -0.59
TRAPPC4-211ENST00000533012 TTC24A2A3L6 582 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 CFAP69A5D8W1 941 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 RNF103O00237 685 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 PGRMC1O00264 195 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZNF185O15231 689 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 MAP3K13O43283 966 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 LIASO43766 372 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 RNASEH2AO75792 299 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 HLA-DQB2P05538 268 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 UGT2B4P06133 528 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 SERPINA4P29622 427 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 PAFAH1B1P43034 410 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 WASHC5Q12768 1159 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZBTB17Q13105 803 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 SNX1Q13596 522 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 SIX1Q15475 284 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 MAP7D1Q3KQU3 841 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 POM121L1PQ3SYA9 428 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZNF805Q5CZA5 627 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 CFAP58Q5T655 872 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 DRICH1Q6PGQ1 229 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 USP30Q70CQ3 517 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 C11orf74Q86VG3 221 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 CAMK1DQ8IU85 385 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 PAF1Q8N7H5 531 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZBTB44Q8NCP5 570 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 HCAR2Q8TDS4 363 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 RLN3Q8WXF3 142 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 ATG4AQ8WYN0 398 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 NKD2Q969F2 451 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 C16orf45Q96MC5 204 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 NEUROG2Q9H2A3 272 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 USP29Q9HBJ7 922 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 NOD2Q9HC29 1040 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 USP36Q9P275 1121 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 RNF14Q9UBS8 474 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 CYP8B1Q9UNU6 501 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZNF148Q9UQR1 794 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 INVSQ9Y283 1065 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 DRG1Q9Y295 367 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 PCDHGA2Q9Y5H1 932 aa11.37□□□□□ -0.59
TRAPPC4-211ENST00000533012 A0A1W2PP55 124 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 A0A1W2PQ67 120 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 C5orf60A6NFR6 353 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 HRO43593 1189 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 NDUFS2O75306 463 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 GJB3O75712 270 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 RPP40O75818 363 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 PIGNO95427 931 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 IGLV3-19P01714 112 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 SERPINF2P08697 491 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ITGB7P26010 798 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 CD6P30203 668 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 P2RY2P41231 377 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 PTPN5P54829 565 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 POLR2LP62875 67 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 DSC2Q02487 901 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 CNTN1Q12860 1018 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ANKRD20A2Q5SQ80 823 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ANKRD20A1Q5TYW2 823 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ANKRD20A3Q5VUR7 823 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ALG1LQ6GMV1 187 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 FBXL19Q6PCT2 694 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZC3H14Q6PJT7 736 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 SLC36A4Q6YBV0 504 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ERN2Q76MJ5 926 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 TTC7BQ86TV6 843 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 FAM124AQ86V42 546 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 CREG2Q8IUH2 290 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZNF567Q8N184 647 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 AADATQ8N5Z0 425 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 FAM71DQ8N9W8 422 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 PRSS33Q8NF86 280 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ARRDC2Q8TBH0 407 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 GAB3Q8WWW8 586 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 MAGOHBQ96A72 148 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ARRDC3Q96B67 414 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 TOE1Q96GM8 510 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZNF419Q96HQ0 510 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 CAPZA3Q96KX2 299 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 TMEM121Q9BTD3 319 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 AP1M1Q9BXS5 423 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 HDAC8Q9BY41 377 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 BTBD1Q9H0C5 482 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms