RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PCDH8O95206 1070 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 WNT1P04628 370 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 CD48P09326 243 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 CD59P13987 128 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 IL4RP24394 825 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 CTSKP43235 329 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 ARSEP51690 589 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 C21orf59P57076 290 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 TAS2R40P59535 323 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 IL10RBQ08334 325 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 MMRN1Q13201 1228 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 MESDQ14696 234 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 ATP13A4Q4VNC1 1196 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 NAPEPLDQ6IQ20 393 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 PIP4P1Q86T03 277 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 HORMAD1Q86X24 394 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 RHOT2Q8IXI1 618 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 DEFB124Q8NES8 71 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 RFFLQ8WZ73 363 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 RAB7BQ96AH8 199 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 SKA1Q96BD8 255 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 KLHL32Q96NJ5 620 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 IPO11Q9UI26 975 aaKnown RBP15.58■□□□□ 0.08
CPSF1-210ENST00000532935 FNDC3AQ9Y2H6 1198 aaKnown RBP15.58■□□□□ 0.08
CPSF1-210ENST00000532935 FADS3Q9Y5Q0 445 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 GIPC1O14908 333 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 INSIG1O15503 277 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 KRT7P08729 469 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 ZNF883P0CG24 379 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 CEACAM1P13688 526 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 SERPINB6P35237 376 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 ARHGAP25P42331 645 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 ABL2P42684 1182 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 DPYSL3Q14195 570 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 RFTN1Q14699 578 aaPredicted RBP15.57■□□□□ 0.08
CPSF1-210ENST00000532935 ZNF284Q2VY69 593 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 SLC45A4Q5BKX6 768 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 KCTD6Q8NC69 237 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 KLK6Q92876 244 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 CPEB1Q9BZB8 566 aaKnown RBP15.57■□□□□ 0.08
CPSF1-210ENST00000532935 SLC32A1Q9H598 525 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 KLHL11Q9NVR0 708 aa15.57■□□□□ 0.08
CPSF1-210ENST00000532935 ZFR2Q9UPR6 939 aaKnown RBP15.57■□□□□ 0.08
CPSF1-210ENST00000532935 TDRD6O60522 2096 aaKnown RBP15.56■□□□□ 0.08
CPSF1-210ENST00000532935 PRAMEF26H0Y7S4 382 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 KCNK3O14649 394 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 SLC31A1O15431 190 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 PIGNO95427 931 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 PRLRP16471 622 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 MAGEA1P43355 309 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 RPS21P63220 83 aaKnown RBP15.56■□□□□ 0.08
CPSF1-210ENST00000532935 GRM3Q14832 879 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 PDK2Q15119 407 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 TCEAL1Q15170 157 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 ZNF423Q2M1K9 1284 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 TMEM259Q4ZIN3 620 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 SEL1L3Q68CR1 1132 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 KIAA1161Q6NSJ0 714 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 MAP7D3Q8IWC1 876 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 CCDC170Q8IYT3 715 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 MFSD2AQ8NA29 543 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 TSEN2Q8NCE0 465 aaKnown RBP15.56■□□□□ 0.08
CPSF1-210ENST00000532935 FEM1CQ96JP0 617 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 ZNF599Q96NL3 588 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 PANX2Q96RD6 677 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 ZNF670Q9BS34 389 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 CINPQ9BW66 212 aaPredicted RBP15.56■□□□□ 0.08
CPSF1-210ENST00000532935 CALN1Q9BXU9 219 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 TM7SF3Q9NS93 570 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 DKK3Q9UBP4 350 aa15.56■□□□□ 0.08
CPSF1-210ENST00000532935 H0Y8X5 98 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 TLR4O00206 839 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 TSPAN6O43657 245 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 SH3BP5O60239 455 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 LCA5LO95447 670 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 ADRB1P08588 477 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 RGRP47804 291 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 CSNK1DP48730 415 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 LBRQ14739 615 aaKnown RBP15.55■□□□□ 0.08
CPSF1-210ENST00000532935 STAT4Q14765 748 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 ANKRD20A8PQ5CZ79 823 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 ZFYVE27Q5T4F4 411 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 N4BP2L1Q5TBK1 243 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-210ENST00000532935 TMCO4Q5TGY1 634 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 SRLQ86TD4 932 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 TTC7BQ86TV6 843 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 IQCHQ86VS3 1027 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 NAXDQ8IW45 347 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 ATPAF2Q8N5M1 289 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 TMEM145Q8NBT3 493 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 PCDH19Q8TAB3 1148 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 ANP32BQ92688 251 aaKnown RBP15.55■□□□□ 0.08
CPSF1-210ENST00000532935 MYOCQ99972 504 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 SEPT3Q9UH03 358 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 GGT7Q9UJ14 662 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 ITM2BQ9Y287 266 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 CA5BQ9Y2D0 317 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 PCDHGB2Q9Y5G2 931 aa15.55■□□□□ 0.08
CPSF1-210ENST00000532935 NEMP1O14524 444 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 AREL1O15033 823 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms