RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 KLF6Q99612 283 aaPredicted RBP16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 EIF3CQ99613 913 aaKnown RBP16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 SNRNP25Q9BV90 132 aaKnown RBP16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 C1QTNF2Q9BXJ5 285 aa16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 OSBPL1AQ9BXW6 950 aa16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 PDFQ9HBH1 243 aa16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 KLHL11Q9NVR0 708 aa16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 LHX3Q9UBR4 397 aa16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 PCSK1NQ9UHG2 260 aa16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 GGT7Q9UJ14 662 aa16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 GOLGA4Q13439 2230 aaKnown RBP16.04■□□□□ 0.16
LDLRAD3-205ENST00000532490 TAF4O00268 1085 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 AREL1O15033 823 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 TSPAN6O43657 245 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 DESP17661 470 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 MIPP30301 263 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 NDST2P52849 883 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 DNAJC3Q13217 504 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 AFMIDQ63HM1 303 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 GDPD4Q6W3E5 623 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 ZSCAN30Q86W11 494 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 ZNF354CQ86Y25 554 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 FAM174AQ8TBP5 190 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 ASB12Q8WXK4 309 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 ZCCHC14Q8WYQ9 949 aaKnown RBP16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 SYN2Q92777 582 aaPredicted RBP16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 ZNF653Q96CK0 615 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 GDAP1L1Q96MZ0 367 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 LENG8Q96PV6 779 aaPredicted RBP16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 DHX35Q9H5Z1 703 aaKnown RBP16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 CAAP1Q9H8G2 361 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 PCDHGA1Q9Y5H4 931 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 KNTC1P50748 2209 aa16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 TDRD6O60522 2096 aaKnown RBP16.03■□□□□ 0.16
LDLRAD3-205ENST00000532490 POM121BA6NF01 834 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 IGLON5A6NGN9 336 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 J3KR12 359 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 EEF2KO00418 725 aaKnown RBP16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 INSIG1O15503 277 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 SDC3O75056 442 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 LRCH4O75427 683 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 IGSF6O95976 241 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 GIMD1P0DJR0 217 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 MYBL1P10243 752 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 ACADVLP49748 655 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 UBASH3AP57075 661 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 RHOAP61586 193 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 CAMK2BQ13554 666 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 DHRS13Q6UX07 377 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 Q6ZSR6 202 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 MARCH9Q86YJ5 346 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 PSTKQ8IV42 348 aaKnown RBP16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 ARHGAP12Q8IWW6 846 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 CPEB1Q9BZB8 566 aaKnown RBP16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 SLC39A8Q9C0K1 460 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 DONSONQ9NYP3 566 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 DKK3Q9UBP4 350 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 ITM2BQ9Y287 266 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 SCINQ9Y6U3 715 aa16.02■□□□□ 0.16
LDLRAD3-205ENST00000532490 SRRM3A6NNA2 597 aaPredicted RBP16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 A6NNZ2 444 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 TRIM38O00635 465 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 PRAMEF11O60813 436 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 RNF8O76064 485 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 C1SP09871 688 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 TIMP2P16035 220 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 ERCC2P18074 760 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 DGKAP23743 735 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 HCAR3P49019 387 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 PAPOLAP51003 745 aaKnown RBP16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 PROX2Q3B8N5 592 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 KYAT3Q6YP21 454 aaKnown RBP16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 RFX8Q6ZV50 586 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 DCP2Q8IU60 420 aaKnown RBP16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 GALNT15Q8N3T1 639 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 TRIM11Q96F44 468 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 IFT43Q96FT9 208 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 CELF6Q96J87 481 aaKnown RBP16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 CALN1Q9BXU9 219 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 MRPL47Q9HD33 250 aaKnown RBP16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 UCKL1Q9NWZ5 548 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 MYO1AQ9UBC5 1043 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 UBA2Q9UBT2 640 aaPredicted RBP16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 CAPN11Q9UMQ6 739 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 BZW2Q9Y6E2 419 aaKnown RBP16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 LAMA5O15230 3695 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 CHD6Q8TD26 2715 aa16.01■□□□□ 0.15
LDLRAD3-205ENST00000532490 PRPSAP2O60256 369 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 TCF4P15884 667 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 ITIH2P19823 946 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 IL1R2P27930 398 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 PCK1P35558 622 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 TPM4P67936 248 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 ZBED6P86452 979 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 RAD51Q06609 339 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 DPYSQ14117 519 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 FZD2Q14332 565 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 ACAP1Q15027 740 aa16■□□□□ 0.15
LDLRAD3-205ENST00000532490 CCDC157Q569K6 752 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms