RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 IL17RCQ8NAC3 791 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 PLPP7Q8NBV4 271 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 OR2AP1Q8NGE2 309 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 CCHCR1Q8TD31 782 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 LRIG1Q96JA1 1093 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 SPATA13Q96N96 652 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 NUDCD1Q96RS6 583 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 FAM118BQ9BPY3 351 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 TMEM121Q9BTD3 319 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 POLR1EQ9GZS1 481 aaKnown RBP12.69□□□□□ -0.38
COPB1-208ENST00000532088 CHRDQ9H2X0 955 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 LMAN1LQ9HAT1 526 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 RBM22Q9NW64 420 aaKnown RBP eCLIP12.69□□□□□ -0.38
COPB1-208ENST00000532088 PGPEP1Q9NXJ5 209 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 LHX3Q9UBR4 397 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 SLCO3A1Q9UIG8 710 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 MMP17Q9ULZ9 603 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 CTAGE15A4D2H0 777 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 K7ERQ8 282 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 SGK1O00141 431 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 KCNK1O00180 336 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 RNF103O00237 685 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 SMAD6O43541 496 aaKnown RBP12.68□□□□□ -0.38
COPB1-208ENST00000532088 GAS8O95995 478 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 JCHAINP01591 159 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 CTAGE8P0CG41 777 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 TIMP2P16035 220 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 ACTN2P35609 894 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 RECQLP46063 649 aaPredicted RBP12.68□□□□□ -0.38
COPB1-208ENST00000532088 CLCN5P51795 746 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 WDR4P57081 412 aaKnown RBP12.68□□□□□ -0.38
COPB1-208ENST00000532088 AP1S1P61966 158 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 CAMK2GQ13555 558 aaPredicted RBP12.68□□□□□ -0.38
COPB1-208ENST00000532088 SNX1Q13596 522 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 ELAVL3Q14576 367 aaKnown RBP12.68□□□□□ -0.38
COPB1-208ENST00000532088 CARD16Q5EG05 197 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 EMC10Q5UCC4 262 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 SYT13Q7L8C5 426 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 BMP8AQ7Z5Y6 402 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 CTAGE6Q86UF2 777 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 CTAGE4Q8IX94 777 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 KLHDC8BQ8IXV7 354 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 ZNF567Q8N184 647 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 CNTD1Q8N815 330 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 RPLP0P6Q8NHW5 317 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 PTPRN2Q92932 1015 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 GDAP1L1Q96MZ0 367 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 TUBGCP5Q96RT8 1024 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 CPEB1Q9BZB8 566 aaKnown RBP12.68□□□□□ -0.38
COPB1-208ENST00000532088 PCDH9Q9HC56 1237 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 RBM12Q9NTZ6 932 aaKnown RBP12.68□□□□□ -0.38
COPB1-208ENST00000532088 PAK5Q9P286 719 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 KLHL8Q9P2G9 620 aaPredicted RBP12.68□□□□□ -0.38
COPB1-208ENST00000532088 SIT1Q9Y3P8 196 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 PCDHB11Q9Y5F2 797 aa12.68□□□□□ -0.38
COPB1-208ENST00000532088 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.67□□□□□ -0.38
COPB1-208ENST00000532088 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.67□□□□□ -0.38
COPB1-208ENST00000532088 TMEM221A6NGB7 291 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 TTC34A8MYJ7 566 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 M0R296 226 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 KLF8O95600 359 aaPredicted RBP12.67□□□□□ -0.38
COPB1-208ENST00000532088 ECEL1O95672 775 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 POP4O95707 220 aaKnown RBP12.67□□□□□ -0.38
COPB1-208ENST00000532088 HLA-DQB2P05538 268 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 AOC1P19801 751 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 PRKCHP24723 683 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 GDF10P55107 478 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 SEC13P55735 322 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 RAD51Q06609 339 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 STARD3Q14849 445 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 PARP6Q2NL67 630 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 ACCSLQ4AC99 568 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 ANKRD20A2Q5SQ80 823 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 C9orf64Q5T6V5 341 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 ANKRD20A1Q5TYW2 823 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 ANKRD20A3Q5VUR7 823 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 CWF19L1Q69YN2 538 aaKnown RBP12.67□□□□□ -0.38
COPB1-208ENST00000532088 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 PGBD5Q8N414 524 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 SPEM1Q8N4L4 309 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 CCDC89Q8N998 374 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 FAM71DQ8N9W8 422 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 TSEN2Q8NCE0 465 aaKnown RBP12.67□□□□□ -0.38
COPB1-208ENST00000532088 OR2A12Q8NGT7 310 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 HCAR2Q8TDS4 363 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 ITPKCQ96DU7 683 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 ZNF419Q96HQ0 510 aaPredicted RBP12.67□□□□□ -0.38
COPB1-208ENST00000532088 FCRL5Q96RD9 977 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 FOXQ1Q9C009 403 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 DDX47Q9H0S4 455 aaKnown RBP12.67□□□□□ -0.38
COPB1-208ENST00000532088 SLC25A51Q9H1U9 297 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 GBA3Q9H227 469 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 MFSD1Q9H3U5 465 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 GLOD4Q9HC38 313 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 CD248Q9HCU0 757 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 NT5MQ9NPB1 228 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 VPS45Q9NRW7 570 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 CACNA2D2Q9NY47 1150 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 SEPT10Q9P0V9 454 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms