RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 GKAP1Q5VSY0 366 aaPredicted RBP3.14□□□□□ -1.91
CD44-234ENST00000531873 CLEC17AQ6ZS10 378 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 PRPF39Q86UA1 669 aaKnown RBP3.14□□□□□ -1.91
CD44-234ENST00000531873 GPAT4Q86UL3 456 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 CCDC25Q86WR0 208 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 LINC00346Q8IVM7 164 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 UEVLDQ8IX04 471 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 FAM9BQ8IZU0 186 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 CADM3Q8N126 398 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 AMER2Q8N7J2 671 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 FAM47BQ8NA70 645 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 CCDC191Q8NCU4 936 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 PIGKQ92643 395 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 SMARCE1Q969G3 411 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 C1orf74Q96LT6 269 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 YME1L1Q96TA2 773 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 PIMREGQ9BSJ6 248 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 EFHD1Q9BUP0 239 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 NUF2Q9BZD4 464 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 TKTL2Q9H0I9 626 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 MOV10Q9HCE1 1003 aaKnown RBP3.14□□□□□ -1.91
CD44-234ENST00000531873 PDE7BQ9NP56 450 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 SLC6A13Q9NSD5 602 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 PLK2Q9NYY3 685 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 SUCLA2Q9P2R7 463 aaPredicted RBP3.14□□□□□ -1.91
CD44-234ENST00000531873 SLC17A6Q9P2U8 582 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 CHORDC1Q9UHD1 332 aaPredicted RBP3.14□□□□□ -1.91
CD44-234ENST00000531873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.14□□□□□ -1.91
CD44-234ENST00000531873 PCDHGB5Q9Y5G0 923 aa3.14□□□□□ -1.91
CD44-234ENST00000531873 WDR33Q9C0J8 1336 aaKnown RBP3.14□□□□□ -1.91
CD44-234ENST00000531873 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 A0A1W2PRG0 241 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 C2CD4BA6NLJ0 364 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 LRRC53A6NM62 1247 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 HSPB2A8KAH6 182 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 FAM157AC9JC47 383 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 CCER2I3L3R5 266 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 EBAG9O00559 213 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 UBE2CO00762 179 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 SH2B2O14492 632 aaPredicted RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 TP73O15350 636 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 DKC1O60832 514 aaKnown RBP eCLIP3.13□□□□□ -1.91
CD44-234ENST00000531873 ENTPD3O75355 529 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 C1QL1O75973 258 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 NFATC1O95644 943 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 TFP02787 698 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 GLULP15104 373 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 MCM3P25205 808 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 KLRC2P26717 231 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 CHRNA5P30532 468 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 EIF2DP41214 584 aaKnown RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 GNAQP50148 359 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 YWHAZP63104 245 aaKnown RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 TFF2Q03403 129 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 GOLGA8DPQ0D2H9 430 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 GRIK3Q13003 919 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 AIMP2Q13155 320 aaKnown RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 FHL2Q14192 279 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 CRYMQ14894 314 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 RASA2Q15283 850 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 HSPB2Q16082 182 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 COL28A1Q2UY09 1125 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 ASPHD1Q5U4P2 390 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 HIST2H2BCQ6DN03 193 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 HIST2H2BDQ6DRA6 164 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 KIAA0930Q6ICG6 404 aaPredicted RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 JADE1Q6IE81 842 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 TMEM154Q6P9G4 183 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 TSSK4Q6SA08 328 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 SARM1Q6SZW1 724 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 LRIG3Q6UXM1 1119 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 NOXA1Q86UR1 476 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 TDRPQ86YL5 185 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 TAGAPQ8N103 731 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 NKAIN3Q8N8D7 197 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 PNLDC1Q8NA58 520 aaKnown RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 CAGE1Q8TC20 777 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 WIPF2Q8TF74 440 aaPredicted RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 KAT2BQ92831 832 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 MAP4K1Q92918 833 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 CHFRQ96EP1 664 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 RADILQ96JH8 1075 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 H2AFJQ9BTM1 129 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 ZNF341Q9BYN7 854 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 KAT14Q9H8E8 782 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 ACTR5Q9H9F9 607 aaPredicted RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 WDR6Q9NNW5 1121 aaKnown RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 ARPP21Q9UBL0 812 aaPredicted RBP3.13□□□□□ -1.91
CD44-234ENST00000531873 MAFFQ9ULX9 164 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 SLC8A2Q9UPR5 921 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 ZNF711Q9Y462 761 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 PCSK5Q92824 1860 aa3.13□□□□□ -1.91
CD44-234ENST00000531873 A0A0U1RQF3 1178 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 DDTLA6NHG4 134 aaPredicted RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 CDRT15L2A8MXV6 281 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 FOXO6A8MYZ6 492 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 USP17L23D6RBM5 183 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 MASP2O00187 686 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 SLC25A17O43808 307 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms