RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 RMND1Q9NWS8 449 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 TOR1BO14657 336 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 P4HA2O15460 535 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 CNTN5O94779 1100 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 SMC2O95347 1197 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 ADCY5O95622 1261 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 ALPIP09923 528 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 PRCPP42785 496 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 SERPINH1P50454 418 aaKnown RBP20.14■□□□□ 0.81
HIPK3-205ENST00000531504 DNA2P51530 1060 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 CCNHP51946 323 aaPredicted RBP20.14■□□□□ 0.81
HIPK3-205ENST00000531504 CCL7P80098 99 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 LRRC63Q05C16 580 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 SLC20A2Q08357 652 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 SERINC3Q13530 473 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 ALFQ53S48 1182 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 CLPBQ9H078 707 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 SIRPGQ9P1W8 387 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 KIAA1468Q9P260 1216 aa20.14■□□□□ 0.81
HIPK3-205ENST00000531504 A0A0D9SEW6 157 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 PRAMEF33A0A0G2JMD5 474 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 A0A1W2PQC6 194 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 PRAMEF10O60809 474 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 CR2P20023 1033 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 CD82P27701 267 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 CARD16Q5EG05 197 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 ANKRD40Q6AI12 368 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 LRRC31Q6UY01 552 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 PCDH19Q8TAB3 1148 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 SMARCE1Q969G3 411 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 FUCA2Q9BTY2 467 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 LRRN3Q9H3W5 708 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 ZDHHC6Q9H6R6 413 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 RABGEF1Q9UJ41 708 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 CNTN6Q9UQ52 1028 aa20.13■□□□□ 0.81
HIPK3-205ENST00000531504 A0A1W2PQM1 296 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 THAP12O43422 761 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 ZNF821O75541 412 aaPredicted RBP20.12■□□□□ 0.81
HIPK3-205ENST00000531504 CTSEP14091 401 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 OR1E1P30953 314 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 CYP4F2P78329 520 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 CLCA4Q14CN2 919 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 COBLL1Q53SF7 1204 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 ZNF783Q6ZMS7 281 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 ARHGEF19Q8IW93 802 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 LMO3Q8TAP4 145 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 SPATA20Q8TB22 786 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 ZNF606Q8WXB4 792 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 CENPTQ96BT3 561 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 CMKLR1Q99788 373 aa20.12■□□□□ 0.81
HIPK3-205ENST00000531504 C16orf96A6NNT2 1141 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 GRAP2O75791 330 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 ITIH1P19827 911 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 GNA15P30679 374 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 IGFALSP35858 605 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 EIF4A3P38919 411 aaKnown RBP20.11■□□□□ 0.81
HIPK3-205ENST00000531504 C1QBPQ07021 282 aaKnown RBP20.11■□□□□ 0.81
HIPK3-205ENST00000531504 CCDC40Q4G0X9 1142 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 BRMS1LQ5PSV4 323 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 ACBD5Q5T8D3 534 aaPredicted RBP20.11■□□□□ 0.81
HIPK3-205ENST00000531504 TMEM164Q5U3C3 297 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 BORAQ6PGQ7 559 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 TFAP2DQ7Z6R9 452 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 VPS36Q86VN1 386 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 ZFAND4Q86XD8 727 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 GKN2Q86XP6 184 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 DTX1Q86Y01 620 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 CCNJLQ8IV13 435 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 HTR3CQ8WXA8 447 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 GSDMAQ96QA5 445 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 ANP32EQ9BTT0 268 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 SPON2Q9BUD6 331 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 EPN3Q9H201 632 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 WDCPQ9H6R7 721 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 PNMA8BQ9ULN7 279 aaPredicted RBP20.11■□□□□ 0.81
HIPK3-205ENST00000531504 GPR34Q9UPC5 381 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 PAXBP1Q9Y5B6 917 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 UNC13CQ8NB66 2214 aa20.11■□□□□ 0.81
HIPK3-205ENST00000531504 SPTAN1Q13813 2472 aaKnown RBP20.11■□□□□ 0.81
HIPK3-205ENST00000531504 MYO9AB2RTY4 2548 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 ILVBLA1L0T0 632 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 DAB1O75553 588 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 ABL2P42684 1182 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 HK3P52790 923 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 PMS1P54277 932 aaKnown RBP20.1■□□□□ 0.81
HIPK3-205ENST00000531504 FOXK1P85037 733 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 ZNF805Q5CZA5 627 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 ZNF658Q5TYW1 1059 aaPredicted RBP20.1■□□□□ 0.81
HIPK3-205ENST00000531504 PTRH1Q86Y79 214 aaKnown RBP20.1■□□□□ 0.81
HIPK3-205ENST00000531504 OR7D4Q8NG98 312 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 KREMEN1Q96MU8 473 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 EDEM3Q9BZQ6 932 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 B3GNT4Q9C0J1 378 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 TKTL2Q9H0I9 626 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 ATP13A1Q9HD20 1204 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 ARHGEF38Q9NXL2 777 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 RRN3Q9NYV6 651 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 HECAQ9UBI9 543 aaPredicted RBP20.1■□□□□ 0.81
HIPK3-205ENST00000531504 GGT7Q9UJ14 662 aa20.1■□□□□ 0.81
HIPK3-205ENST00000531504 TUBD1Q9UJT1 453 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms