RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 DNAJC24Q6P3W2 148 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 SCYL2Q6P3W7 929 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 TMC6Q7Z403 805 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 DCBLD1Q8N8Z6 715 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 BAP1Q92560 729 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 KLHL32Q96NJ5 620 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 NLGN3Q9NZ94 848 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 GGT7Q9UJ14 662 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 CLCA2Q9UQC9 943 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 ITM2BQ9Y287 266 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 AK5Q9Y6K8 562 aa16.02■□□□□ 0.16
CPSF1-205ENST00000531042 ANKRD62A6NC57 917 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 NEMP2A6NFY4 417 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 NEMP1O14524 444 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 SCAMP1O15126 338 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 SPINT1O43278 529 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 TMCC1O94876 653 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 CSF2P04141 144 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 AIF1P55008 147 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 YBEYP58557 167 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-205ENST00000531042 SEMG2Q02383 582 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 INO80DQ53TQ3 878 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-205ENST00000531042 GDPD4Q6W3E5 623 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 ZNF354CQ86Y25 554 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 DENND6BQ8NEG7 585 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 CASKIN2Q8WXE0 1202 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 ARHGEF26Q96DR7 871 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 APOLD1Q96LR9 279 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 MCEEQ96PE7 176 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 CNPY3Q9BT09 278 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 TTYH3Q9C0H2 523 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 KLC2Q9H0B6 622 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 FZD10Q9ULW2 581 aa16.01■□□□□ 0.15
CPSF1-205ENST00000531042 WASH4PA8MWX3 477 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 RASA4BC9J798 803 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 K7ESM1 405 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 AREL1O15033 823 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 RASA4O43374 803 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 TLX3O43711 291 aaPredicted RBP16■□□□□ 0.15
CPSF1-205ENST00000531042 CREB3O43889 395 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 MT-CO3P00414 261 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 CCDC172P0C7W6 258 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 NME1P15531 152 aaKnown RBP16■□□□□ 0.15
CPSF1-205ENST00000531042 FERP16591 822 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 RAD51Q06609 339 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 SERINC3Q13530 473 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 PDE1CQ14123 709 aaPredicted RBP16■□□□□ 0.15
CPSF1-205ENST00000531042 TPRG1LQ5T0D9 272 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 ACAD10Q6JQN1 1059 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 TTC7BQ86TV6 843 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 PARGQ86W56 976 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 MCOLN2Q8IZK6 566 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 FAM181AQ8N9Y4 354 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 HMCESQ96FZ2 354 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 GDAP1L1Q96MZ0 367 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 DCBLD2Q96PD2 775 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 EPAS1Q99814 870 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 DUSP23Q9BVJ7 150 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 CATSPERBQ9H7T0 1116 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 IPO11Q9UI26 975 aaKnown RBP16■□□□□ 0.15
CPSF1-205ENST00000531042 MFHAS1Q9Y4C4 1052 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 ATRXP46100 2492 aa16■□□□□ 0.15
CPSF1-205ENST00000531042 LY6G6EA0A0G2JKS1 128 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 NEBLO76041 1014 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 IGSF6O95976 241 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 MYF5P13349 255 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 ATP1A3P13637 1013 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 EIF2S3P41091 472 aaKnown RBP15.99■□□□□ 0.15
CPSF1-205ENST00000531042 PFN3P60673 137 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 RHOAP61586 193 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 COL9A2Q14055 689 aaPredicted RBP15.99■□□□□ 0.15
CPSF1-205ENST00000531042 PARP15Q460N3 678 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 LRRC73Q5JTD7 316 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 DCUN1D2Q6PH85 259 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 KDM7AQ6ZMT4 941 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 IRF2BP2Q7Z5L9 587 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 UMODL1-AS1Q8N2C9 162 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 NETO2Q8NC67 525 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 ZNF548Q8NEK5 533 aaPredicted RBP15.99■□□□□ 0.15
CPSF1-205ENST00000531042 CENPTQ96BT3 561 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 SYT11Q9BT88 431 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 USP29Q9HBJ7 922 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 KLF15Q9UIH9 416 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 CSNK1G3Q9Y6M4 447 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 U3KQA8 63 aa15.99■□□□□ 0.15
CPSF1-205ENST00000531042 GOLGA6L22H0YM25 854 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 H3BM21 787 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 FGF10O15520 208 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-205ENST00000531042 OPA1O60313 960 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 GP1BAP07359 652 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 TIMP2P16035 220 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 DUSP3P51452 185 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-205ENST00000531042 OGDHQ02218 1023 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 EIF2B5Q13144 721 aaKnown RBP15.98■□□□□ 0.15
CPSF1-205ENST00000531042 SOWAHCQ53LP3 525 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-205ENST00000531042 CCDC183Q5T5S1 534 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 CDCP2Q5VXM1 449 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 AOPEPQ8N6M6 819 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 CRELD1Q96HD1 420 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 VCPIP1Q96JH7 1222 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms