RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SPATA5L1Q9BVQ7 753 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 RNF208Q9H0X6 261 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 SOHLH2Q9NX45 425 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ZNHIT2Q9UHR6 403 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 COG5Q9UP83 839 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 LINC00854A0A1B0GVQ3 168 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 RPL22P35268 128 aaKnown RBP8.55□□□□□ -1.04
CTNND1-227ENST00000530748 PLK1P53350 603 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 CDC42P60953 191 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ZDHHC20Q5W0Z9 365 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 EIF3MQ7L2H7 374 aaKnown RBP8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ARCQ7LC44 396 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 PAGE2Q7Z2X7 111 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ZDHHC13Q8IUH4 622 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 DHRSXQ8N5I4 330 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ACMSDQ8TDX5 336 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 HIC2Q96JB3 615 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 TRIM8Q9BZR9 551 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 LEF1Q9UJU2 399 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-227ENST00000530748 MYOM1P52179 1685 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 URADA6NGE7 173 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 CHURC1-FNTBB4DL54 471 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 GOT1P17174 413 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 EPS8Q12929 822 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 GALNT3Q14435 633 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 UGCGQ16739 394 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 C9orf57Q5W0N0 161 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ZNF57Q68EA5 555 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-227ENST00000530748 CES5AQ6NT32 575 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 C11orf88Q6PI97 169 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 LRRC55Q6ZSA7 311 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 STK32CQ86UX6 486 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 STK32AQ8WU08 396 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 FERD3LQ96RJ6 166 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 TBCDQ9BTW9 1192 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 RHBGQ9H310 441 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 POLR1DQ9Y2S0 133 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 TRIM43BA6NCK2 446 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 FKTNO75072 461 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 HIST1H2ABP04908 130 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 SNRPB2P08579 225 aaKnown RBP8.55□□□□□ -1.04
CTNND1-227ENST00000530748 GABRB2P47870 512 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 NOMO3P69849 1222 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 GRM3Q14832 879 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ZNF618Q5T7W0 954 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 HIST3H2AQ7L7L0 130 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 FAM220AQ7Z4H9 259 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 COLGALT2Q8IYK4 626 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 OR52L1Q8NGH7 329 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 KAT5Q92993 513 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 HIST1H2ACQ93077 130 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 RNPEPQ9H4A4 650 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 BRD9Q9H8M2 597 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ST3GAL5Q9UNP4 418 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 PLSCR1O15162 318 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 TSC22D2O75157 780 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 MED26O95402 600 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 CBX6O95503 412 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ITGA2P17301 1181 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 THOP1P52888 689 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 CRADDP78560 199 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 ARMC4Q5T2S8 1044 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 LIPMQ5VYY2 423 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 FOXR2Q6PJQ5 311 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 PROSER1Q86XN7 944 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-227ENST00000530748 RERGQ96A58 199 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-227ENST00000530748 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
CTNND1-227ENST00000530748 KLHL25Q9H0H3 589 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 EPB41L4BQ9H329 900 aa8.55□□□□□ -1.04
CTNND1-227ENST00000530748 BANF1O75531 89 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 RECQL5O94762 991 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 PROCP04070 461 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ADH1AP07327 375 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 MMP3P08254 477 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ITGB3BPQ13352 177 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 NEDD8Q15843 81 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 PSMD5Q16401 504 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 BRMS1LQ5PSV4 323 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 GLIS3Q8NEA6 775 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 CXorf40BQ96DE9 158 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 SPACA7Q96KW9 195 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 NDNQ99608 321 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 FANCEQ9HB96 536 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ZFYVE1Q9HBF4 777 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 RNF19AQ9NV58 838 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 MRPL39Q9NYK5 338 aaKnown RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ZNF232Q9UNY5 417 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 SMIM35A0A1B0GVV1 85 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 BCLAF3A2AJT9 711 aaKnown RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 LRRC10BA6NIK2 292 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 OR6C75A6NL08 312 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 PDE9AO76083 593 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ZNF24P17028 368 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 CCNA2P20248 432 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 MATKP42679 507 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 PEX6Q13608 980 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 XKR6Q5GH73 641 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 CXCL17Q6UXB2 119 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 DNAJC14Q6Y2X3 702 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms