RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 PRRC2BQ5JSZ5 2229 aaKnown RBP16.82■□□□□ 0.28
PACS1-209ENST00000529757 LOC285095A0A1B0GVY8 99 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 EPOP01588 193 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 ARSAP15289 507 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 IGFBP4P22692 258 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 GBP2P32456 591 aaPredicted RBP16.81■□□□□ 0.28
PACS1-209ENST00000529757 LTBRP36941 435 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 CHRNA4P43681 627 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 SULT2A1Q06520 285 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 CDK18Q07002 472 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 COL19A1Q14993 1142 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 RALGPS1Q5JS13 557 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 SPANXN3Q5MJ09 141 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 VITQ6UXI7 678 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 TDRPQ86YL5 185 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 RNF135Q8IUD6 432 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 SLC25A41Q8N5S1 370 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 NAT16Q8N8M0 369 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 ZFYVE19Q96K21 471 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 MSLNLQ96KJ4 702 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 FAM83CQ9BQN1 747 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 STMN4Q9H169 189 aaPredicted RBP16.81■□□□□ 0.28
PACS1-209ENST00000529757 SLC25A13Q9UJS0 675 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 SOX13Q9UN79 622 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 COLQQ9Y215 455 aaPredicted RBP16.81■□□□□ 0.28
PACS1-209ENST00000529757 RPS6KL1Q9Y6S9 549 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 FAM237BA0A1B0GVD1 139 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 K7ERQ8 282 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 SMAD6O43541 496 aaKnown RBP16.81■□□□□ 0.28
PACS1-209ENST00000529757 HLA-DPA1P20036 260 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 PRKCHP24723 683 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 EFTUD2Q15029 972 aaKnown RBP eCLIP16.81■□□□□ 0.28
PACS1-209ENST00000529757 SLC1A5Q15758 541 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 KBTBD12Q3ZCT8 623 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 PCID2Q5JVF3 399 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 SIRPB2Q5JXA9 342 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 ARMC3Q5W041 872 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 CYS1Q717R9 158 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 KIAA0907Q7Z7F0 614 aaPredicted RBP16.81■□□□□ 0.28
PACS1-209ENST00000529757 MFSD6LQ8IWD5 586 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 AHI1Q8N157 1196 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 PPHLN1Q8NEY8 458 aaKnown RBP16.81■□□□□ 0.28
PACS1-209ENST00000529757 EBF3Q9H4W6 596 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 LGALS13Q9UHV8 139 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 FBXO10Q9UK96 956 aa16.81■□□□□ 0.28
PACS1-209ENST00000529757 USP1O94782 785 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 ALDH1A2O94788 518 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 ATXN1LP0C7T5 689 aaKnown RBP16.8■□□□□ 0.28
PACS1-209ENST00000529757 LAMP2P13473 410 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 GCAP28676 217 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 CTSOP43234 321 aaPredicted RBP16.8■□□□□ 0.28
PACS1-209ENST00000529757 FCHO2Q0JRZ9 810 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 POU6F1Q14863 301 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 RASA2Q15283 850 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 SKIDA1Q1XH10 827 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 SRLQ86TD4 932 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 TMEM135Q86UB9 458 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 ADIPOR2Q86V24 386 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 SH2D3CQ8N5H7 860 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 ST13P5Q8NFI4 369 aaPredicted RBP16.8■□□□□ 0.28
PACS1-209ENST00000529757 PTCD2Q8WV60 388 aaKnown RBP16.8■□□□□ 0.28
PACS1-209ENST00000529757 ZNF669Q96BR6 464 aaPredicted RBP16.8■□□□□ 0.28
PACS1-209ENST00000529757 PAFAH2Q99487 392 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 KIFC1Q9BW19 673 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 POMKQ9H5K3 350 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 MOCS1Q9NZB8 636 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 VPS18Q9P253 973 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 PSMC3IPQ9P2W1 217 aaPredicted RBP16.8■□□□□ 0.28
PACS1-209ENST00000529757 CTNNAL1Q9UBT7 734 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 NOVA2Q9UNW9 492 aaKnown RBP16.8■□□□□ 0.28
PACS1-209ENST00000529757 HS3ST2Q9Y278 367 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 ARIH1Q9Y4X5 557 aaPredicted RBP16.8■□□□□ 0.28
PACS1-209ENST00000529757 MYOFQ9NZM1 2061 aa16.8■□□□□ 0.28
PACS1-209ENST00000529757 POLR3GO15318 223 aaPredicted RBP16.79■□□□□ 0.28
PACS1-209ENST00000529757 NDST3O95803 873 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 C1QAP02745 245 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 FGF1P05230 155 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 SRCP12931 536 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 MSH2P43246 934 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 DGKGP49619 791 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 AP1S1P61966 158 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 ECT2LQ008S8 904 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 MLLT1Q03111 559 aaPredicted RBP16.79■□□□□ 0.28
PACS1-209ENST00000529757 ANKRD20A4Q4UJ75 823 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 ATXN7L2Q5T6C5 722 aaPredicted RBP16.79■□□□□ 0.28
PACS1-209ENST00000529757 MBLAC2Q68D91 279 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 TRMT10BQ6PF06 316 aaKnown RBP16.79■□□□□ 0.28
PACS1-209ENST00000529757 NCEH1Q6PIU2 408 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 YAF2Q8IY57 180 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 MICALL1Q8N3F8 863 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 TTC17Q96AE7 1141 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 ELSPBP1Q96BH3 223 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 TLCD1Q96CP7 247 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 MRRFQ96E11 262 aaKnown RBP16.79■□□□□ 0.28
PACS1-209ENST00000529757 RPL10LQ96L21 214 aaKnown RBP16.79■□□□□ 0.28
PACS1-209ENST00000529757 NSMCE3Q96MG7 304 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 NECTIN4Q96NY8 510 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 TRIB3Q96RU7 358 aa16.79■□□□□ 0.28
PACS1-209ENST00000529757 TDRD1Q9BXT4 1180 aaKnown RBP16.79■□□□□ 0.28
PACS1-209ENST00000529757 TM6SF2Q9BZW4 377 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms