RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 GGCXP38435 758 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 MAGEA1P43355 309 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 IRAK1P51617 712 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CCR3P51677 355 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 NEK3P51956 506 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 PLK1P53350 603 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 COPAP53621 1224 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 HSD17B7P56937 341 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 BPIFB3P59826 476 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 TCF15Q12870 199 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 LMAN2Q12907 356 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ZNF177Q13360 481 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 SLC12A1Q13621 1099 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ENPP2Q13822 863 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 DMC1Q14565 340 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 EIF4HQ15056 248 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 RCN1Q15293 331 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ANGPT1Q15389 498 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CLPPQ16740 277 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 LONRF2Q1L5Z9 754 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 BOLA3Q53S33 107 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ERMARDQ5T6L9 678 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 FAM72AQ5TYM5 149 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 MANEALQ5VSG8 457 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 FAM72DQ6L9T8 149 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CHST9Q7L1S5 443 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ANKS1BQ7Z6G8 1248 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 SDCCAG8Q86SQ7 713 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 FAM72BQ86X60 149 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CCDC117Q8IWD4 279 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 AHI1Q8N157 1196 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 NIPA2Q8N8Q9 360 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ANKRD42Q8N9B4 389 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 TXNDC5Q8NBS9 432 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 PRSS33Q8NF86 280 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 SLC35G2Q8TBE7 412 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ZNF564Q8TBZ8 553 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 WFIKKN2Q8TEU8 576 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ZDHHC1Q8WTX9 485 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 TTC17Q96AE7 1141 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 BTBD6Q96KE9 485 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 PPP1R9BQ96SB3 815 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ACOX2Q99424 681 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 EIF3CQ99613 913 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 FAM167BQ9BTA0 163 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 MPP6Q9NZW5 540 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CTTNBP2NLQ9P2B4 639 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 THAP10Q9P2Z0 257 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ANAPC7Q9UJX3 599 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 GGA2Q9UJY4 613 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 INTS6Q9UL03 887 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 USP18Q9UMW8 372 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 FNDC3AQ9Y2H6 1198 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 VSTM5A8MXK1 200 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 WASH3PC4AMC7 463 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 H0Y858 1186 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 K7ESF4 209 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 SGK1O00141 431 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 NPC1O15118 1278 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 PRPSAP2O60256 369 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ADAM23O75077 832 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 LRIG2O94898 1065 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 NDUFA10O95299 355 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ATP5BP06576 529 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 RPSAP08865 295 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 SP9P0CG40 484 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 TDGF1P13385 188 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 PECAM1P16284 738 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 POLR2EP19388 210 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 IL1R2P27930 398 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 NTSR1P30989 418 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ARHGAP25P42331 645 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 HTR3AP46098 478 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 PPM1FP49593 454 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 OXCT1P55809 520 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CTAG1AP78358 180 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CSTF1Q05048 431 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 SEMA3BQ13214 749 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CDH18Q13634 790 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 SPA17Q15506 151 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CRY1Q16526 586 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ZNF528Q3MIS6 628 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 HS1BP3Q53T59 392 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 ZC3H12BQ5HYM0 836 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 EFHC2Q5JST6 749 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 EOGTQ5NDL2 527 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 KIAA1614Q5VZ46 1190 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 MBLAC2Q68D91 279 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CXorf57Q6NSI4 855 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 TSSK4Q6SA08 328 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 C6orf15Q6UXA7 325 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 RAD9BQ6WBX8 426 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 CYP4V2Q6ZWL3 525 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 TRMT11Q7Z4G4 463 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 SPATA21Q7Z572 469 aa6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 SETD3Q86TU7 594 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-209ENST00000529214 LSRQ86X29 649 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms